Clostridioides difficile 630: CDIF630_00456
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Entry
CDIF630_00456 CDS
T03885
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pdc
Clostridioides difficile 630
Pathway
pdc03420
Nucleotide excision repair
pdc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CDIF630_00456 (pcrA)
03430 Mismatch repair
CDIF630_00456 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdc03400
]
CDIF630_00456 (pcrA)
Enzymes [BR:
pdc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CDIF630_00456 (pcrA)
DNA repair and recombination proteins [BR:
pdc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CDIF630_00456 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
CDIF630_00456 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
DUF3553
AAA_11
AAA_22
DEAD
ResIII
CarD_TRCF_RID
Astro_capsid_p
FliD_N
Motif
Other DBs
NCBI-ProteinID:
AJP10025
UniProt:
Q18D66
LinkDB
All DBs
Position
399473..401737
Genome browser
AA seq
754 aa
AA seq
DB search
MNLDTLNPAQREAVEKTEGPVLILAGAGSGKTKVLTTRIAYLIEDKGVQAPNILAITFTN
KAANEMRERVEQNIGPETKDMWISTFHSCCVRILRKDINKIGYNRSFVIYDSADQVTLVK
DCLKELNLSDKVFEPKAVISAISGAKDKLYTPKQFKDINMADNRMVKIADIYALYQDRLK
RNSALDFDDLILKTVELFKANDEVLAYYRSRFRYIMVDEYQDTSKAQYELIKLLAREHQN
ICVVGDDDQSIYGWRGADIRNILEFEKDYDNVHVVKLEQNYRSTQVILDAANKVISNNIE
RKRKKLWSEKKEGELIKIQLTGSEIEEADFIADSIAQIARKENRPYKDFAVLYRANAQAR
PVEDALNRSQIPYNIYGGTKFYERKEIKDLLAYLRVIQNPQDDISIKRIINVPRRGIGLR
TIEKIEDRANLKQESIYSVLIDIETNSDISTKARASISGFVDIIGTLRTIKEVYPVSKLI
EKVLDTTGYMDELVEIRNKNEKDLTGKGEEAQDRIDNLREFISIALEFESSNDDTYENKD
LETFLTSIALTSESNDEEDNDRVSLMTIHTSKGLEFPVVFLTGMEEGLFPISRAIKSMSD
SQIEEERRLCYVGITRAKEELYMSLTEKRTLYGKTNVAIASRFMEELPEECIERLYKVKK
ELSYSKASYNMLDKYTKKYMSTISKSKVADKVNATIKDSNKETNPDDIKLGSKVHHPKFG
VGTVVSIIGTDVTIAFDQQGIKKINKEYTTLNIL
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagatacattaaatcctgctcaaagagaagcagtagaaaagactgaaggtcca
gtacttatactggctggtgctggttcaggtaaaactaaggtattaacaacaagaatagca
tatcttatagaagataaaggtgtacaagcaccaaatatattggctataacatttacaaac
aaagctgcaaatgaaatgagagagagagttgaacaaaatataggtcctgaaactaaggat
atgtggataagtacattccattcttgctgtgttcgtatactaagaaaagatataaataag
attggttacaatagaagttttgtaatttatgattcagcagaccaagttacattggttaaa
gactgtctaaaagaattaaatttaagtgataaagtgtttgaaccaaaagcagttataagt
gcaatttcaggagcaaaagacaaactttatactccaaagcagtttaaagatatcaatatg
gcagataatagaatggttaagattgcagatatttatgcgctatatcaagaccgtttaaaa
agaaatagtgcacttgactttgatgatttaatacttaaaactgtagaacttttcaaggct
aatgatgaagtgttagcatattacagaagcagatttagatacataatggtagatgagtac
caagatacaagtaaagctcaatatgaattgataaaattattagcaagagaacatcaaaat
atttgtgttgttggagatgatgaccaaagtatttatggatggagaggtgcagatataaga
aacatacttgaatttgagaaagattatgacaatgtacatgttgtaaagttagaacaaaat
tataggtctacacaagtgatattagatgcagctaataaagtcatatctaataatatagaa
agaaaaagaaaaaagctttggagtgaaaaaaaagaaggagaacttataaagatacaatta
actggtagcgaaatagaagaggctgatttcattgctgattcaattgcacaaatagctaga
aaagaaaatagaccttataaggattttgcagtactttatagagcaaatgcacaggcaaga
cctgtagaggacgctttaaatagaagtcaaattccatacaatatatatggtggtacaaaa
ttctatgagagaaaagaaataaaggatttgttggcgtatttaagagttattcaaaatcca
caagatgatatatctataaaaaggattataaatgttcctagaagaggtatagggcttaga
actatagaaaaaattgaagatagagctaacttaaaacaggaaagtatatactcagtatta
attgatatagaaacaaattcagatatatctactaaggcaagggcaagtataagtggattt
gttgatattatagggactcttagaactataaaagaagtttatcctgttagcaaacttata
gaaaaagtcttggatactacaggatatatggacgagcttgtagagataagaaataaaaat
gaaaaagatttaacaggcaaaggtgaagaagctcaagacagaattgataatttgagagaa
tttatttctatagctttggagtttgaaagtagtaatgatgatacttatgaaaataaagac
ttagagacattcctaacaagtatagcacttacatctgaatcaaatgatgaagaagacaat
gatagggtttcgcttatgacaattcatacatccaaaggtttagagttccctgttgtgttt
ttaacaggtatggaagaagggttatttcctatatcaagagctataaaatctatgagtgat
tcacaaatagaagaagagagaagactttgttatgttggtataactagagctaaagaagag
ctatatatgtcattgacagagaagagaacattatatggtaaaacaaatgttgcaatagct
tcaagatttatggaagaactgccagaagaatgtatagaaagattgtacaaagtaaaaaaa
gaactaagctattctaaagcaagttataatatgttagataaatatactaaaaagtatatg
agtactataagcaaatctaaagttgcagataaagttaatgctacaataaaagattctaat
aaagaaactaatccagatgatataaaacttggttctaaggtacatcatcctaaatttggg
gttgggacagtggtttctataattggtacagatgttactatagcttttgaccaacaggga
attaaaaaaataaataaagaatatacaacactaaatattttataa
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