Clostridioides difficile 630: CDIF630_00583
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Entry
CDIF630_00583 CDS
T03885
Name
(GenBank) putative helicase, UvrD family
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pdc
Clostridioides difficile 630
Pathway
pdc03420
Nucleotide excision repair
pdc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CDIF630_00583
03430 Mismatch repair
CDIF630_00583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdc03400
]
CDIF630_00583
Enzymes [BR:
pdc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CDIF630_00583
DNA repair and recombination proteins [BR:
pdc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CDIF630_00583
MMR (mismatch excision repair)
Other MMR factors
CDIF630_00583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
UvrD_C_2
Viral_helicase1
AAA_19
PhoH
SLFN-g3_helicase
ADDB_N
DEAD
HdcB
ResIII
NACHT
Motif
Other DBs
NCBI-ProteinID:
AJP10150
UniProt:
Q188P5
LinkDB
All DBs
Position
544992..547106
Genome browser
AA seq
704 aa
AA seq
DB search
MSENKQVVNCDIIASNSKHNMCEYDAELLTFFPDEIAHLIEINNKLDNAFKKAENLVDKL
DKDYMDAKMYMVKNRGEIDPHEMFQNEQGLKQIDNYGAFMVKVRGKINKIKDSPYFARID
FRLKDMDDESKYYIGRFAFDYEDELIILDWRSPIASMFYDYEIGKAGYDAPIGWVDGEIT
RKRQFKIKNGKLEYALESSINIQDDILQKELSHTSDEKMKSIISTIQKEQNQIIRNDKAD
TLIIQGVAGSGKTSIALHRIAFLLYRFKDKISANNVIILSPNKVFGDYISNVLPELGEEP
LCELSFENIAEVQLDRVINFESEKDPLEINDAKWSERVRFKSTLDFVKLIDDYIKQMPNK
IFIPKDYTFGSFTAKSDWIQSRFEAYNRYPVKKRLEKVAEDIHYKFESDNIMEEDLPKVK
SILKSLNGMLTIKNTLTLYKDFFKQMNISNMFVMVEKKTLEWSDVYPFIYIHAAYEGIQE
DKIIRHIVIDEMQDYTPIQYAVINLLFKCKKTILGDFGQLVNPNHTHTLDDMKQLYNDGE
LVMLNKSYRSTFEIINFAKKIQDISSLEPIERHGEEPALLKCNNEQDEINKIKIEIEEFK
KSDNATLGIILKTDNDAKAVYDALREEYSVHLISSESSSFTKGVSITSIKMSKGLEFDEV
IVPSVNNKTYYSDYDHSLLYIACTRAMHKLKLTYVGTLTQLISM
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaataaacaagtagtaaattgcgatattattgcatctaattctaaacataat
atgtgtgaatatgatgcagagttattaactttttttccagatgagattgcacatctaata
gagataaataacaagctagacaatgcttttaagaaagctgaaaatcttgttgacaagctt
gataaggattatatggacgctaaaatgtatatggtaaaaaatcgtggtgaaatagaccca
catgaaatgtttcaaaatgaacaaggactaaaacaaatagataactatggggcttttatg
gtaaaagttcgaggtaagattaataaaatcaaagattctccatactttgctagaatagat
tttaggctgaaagatatggatgatgaatctaagtattatattggtagatttgcatttgat
tatgaagatgagcttataatacttgactggcgttctccaattgccagtatgttttatgat
tatgaaatcggaaaagctggatatgatgctccaataggatgggtggatggagaaataaca
agaaaacgacaatttaaaattaaaaatggaaaattagaatatgcactagaaagttccatt
aatatacaagatgatattcttcaaaaagaacttagtcacacttcagatgaaaaaatgaag
tcaatcatttcaacaatacaaaaggaacaaaatcaaattattagaaatgataaagctgat
acactgattattcaaggggtagctggttctgggaaaacatctatagcattacacagaatt
gcttttcttctttatcgatttaaagataaaatatcagcaaataatgtaattatcctatca
cctaataaagtctttggagactatatttccaatgtccttcctgagcttggagaagagcca
ttatgtgaattaagttttgaaaatatagcagaggtacaattagatagagttattaatttt
gaaagtgagaaagacccattagaaataaatgatgctaaatggtctgaaagagtgcgtttt
aaatctacacttgattttgtaaaacttattgatgattatataaaacaaatgccaaataag
atttttattccaaaagactacacttttggaagttttacagctaaaagtgactggatacag
agtagatttgaggcatataacagatatccagttaagaagagattagagaaggtagctgaa
gacattcattataaatttgaatcagataatattatggaagaagatttaccaaaggtaaaa
agtatacttaaaagtttgaatggaatgttgacaataaaaaatactcttacactatataag
gatttctttaaacaaatgaatatatcaaacatgtttgtgatggtagaaaagaaaacactt
gaatggtcagatgtatacccatttatatatattcatgctgcatatgaaggtatacaagaa
gataagattataaggcatattgttattgatgaaatgcaggattatacacctattcaatat
gctgtaataaacttactttttaagtgtaaaaagactattcttggagattttggacaattg
gttaatcctaatcatactcatacattagatgatatgaaacagctatataatgatggagaa
ttagttatgttgaacaagagttaccgttctacttttgagattattaatttcgccaaaaag
attcaagacatatcttcattagagcctattgaacgacatggtgaagaaccagctttatta
aaatgtaataacgagcaagatgaaataaataagataaaaatagaaattgaagaatttaaa
aagagtgataatgcgactcttggtattatattaaagacagataatgacgctaaagctgta
tatgatgcgttaagagaagaatatagtgttcacttaatatcttctgaaagttctagcttt
acaaaaggagtatccataacttctattaaaatgtcaaaaggtttagagtttgatgaagtt
attgtaccttcagtaaataataaaacatattatagtgattatgaccacagtttgttatat
attgcctgtacacgagctatgcacaaacttaagttaacatatgttggtacattaactcaa
cttataagcatgtag
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