Clostridioides difficile 630: CDIF630_00626
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Entry
CDIF630_00626 CDS
T03885
Symbol
cwpV
Name
(GenBank) putative hemagglutinin / adhesin cwpV
Organism
pdc
Clostridioides difficile 630
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ChiW_Ig_like
CW_binding_2
Motif
Other DBs
NCBI-ProteinID:
AJP10192
LinkDB
All DBs
Position
592201..597072
Genome browser
AA seq
1623 aa
AA seq
DB search
MKIPKKIAAMLTVTMIAGSSTAGIASAQTVATNLTGQERYETAVKISQDGWKNADEVVIV
NDSSIADALSATPFAKAKNAPILLTSKDKLNDKTKAEIQRLKAKKVYLIGGTSVLSTNIE
KEIKDLKISFERISGAERYQTSLELAKKLDAISDVKKIAVVNGEKGLADAVSVGAPAAQN
NMPVILADSKNGTAVADKFIKDAGITQSYVVGGESSISEAVKNKLPNSTRLGGTDRNDTN
AKVIKEFYKKTDLKNAYVTKDGMNKQDQLIDALAVGVLGAKNQSPVVLVGKNLSASQKSL
VNSKSFDKITKVGGNGNETAFNEMKSLQEVKTVEAKTISELKSAIDKATANDVINFKPTS
EVKEAFTIQTDKAVTVNLNGTYTKTVTINMPNGDVNNYAKVDDVVIDDVKDGTFVNYGKI
TNLKVNDKNGAKIENNSKGEIGSLTVASGASQVKVTNGGKITTVTNNSKGTTIDNKGTIS
SVKGDNSPTISGNSPSSNSSGGSSSSGGSSGGSSGGSSSSKVGQIKFSATDKQIKMASGD
KTVDPSDNTYILKLTNGTVKDGDVKANVKVAGLPSGLDYTAVGNRSANTITITVSGTASQ
SIQNDLNNVSVLVKAGAVSGTGATDSIANTTFEIKKYVAPAIGQLTFDATDKQIKMASGD
KTVDPSDDTYVLTLTKGTAKDGDVKANVEVTGLPSGLDYTAEGDSSTNTITITVSRTASQ
AVQTDLDNVSVLVKAGAVSETTATDSAANATFEVKKYVAAPAVGQLTFDATDKQIKMASG
DKTVDPSDDTYVLTLTKGTAKDGDIKANVEVTGLPSGLDYTAEGDSSANTITITVSGTAS
QAVQTDLDNVSVLVKAGAVSETTATDSAANATFEVKKYVAAPAVGQLTFDATDKQIKMAS
GDKTVDPSDDTYVLTLTKGTAKDGDIKANVEVTGLPSGLDYTAEGDSSANTITITVSGTA
SQAVQTDLDNVSVLVKAGAVSETTATDSAANATFEVKKYVAAPAVGQLTFDATDKQIKMA
SGDKTVDPSDDTYVLTLTKGTAKDGDVKANVEVTGLPSGLDYTAEGDSSANTITITVSGT
ASQAVQTDLDNVSVLVKAGAVSETTATDSAANATFEVKKYVAPAIGQLTFDATDKQIKMA
SGDKTVDPSDDTYVLTLTKGTAKDGDVKANVEVTGLPSGLDYTAEGDSSANTITITVSGT
ASQAVQTDLDNVSVLVKAGAVSETTATDSAANATFEVKKYVAPAIGQLTFDATDKQIKMA
SGDKTVDPSDDTYVLTLTKGTAKDGDVKANVEVTGLPSGLDYTAEGDSSANTITITVSGT
ASQAVQTDLDNVSVLVKAGAVSETTATDSAANATFEVKKYVAPAIGQLTFDATDKQIKMA
SGDKTVDPSDDTYVLTLTKGTAKDGDVKANVEVIGLPSGLDYTAEGDSSANTITITVSGT
ASQAVQTDLDNVSVLVKAGAVSETTATDSAANATFEVKKYVAPAIGQLTFDATDKQIKMA
SGDKTVDPSDDTYVLTLTKGTAKDGDVKANVEVIGLPSGLDYTAEGDSSANTITITVSGT
ASQAVQTDLDNISVLVKAGAVSETTATDSAANATFEVKKHASDPISTIGKISSGLSSLFN
ILK
NT seq
4872 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataccaaagaagattgctgcaatgcttacagttacaatgatagctggaagttca
acagcaggcatagctagtgcacaaactgtggcaacaaatttaacagggcaagaaagatat
gaaactgctgttaaaataagtcaagatggatggaaaaatgctgatgaggtagtaatcgta
aacgactcatctatagcagatgctctatctgcaacaccatttgcaaaagcaaaaaatgct
ccaatacttttaacaagtaaagataaattaaatgataagacgaaagcagaaatacaaaga
ttaaaagctaaaaaagtatacttaataggtggaacttctgtattaagtacaaatatagaa
aaagaaataaaagatttaaaaatatcttttgagagaatctctggagctgagagatatcaa
acatccttagaattagcaaagaaattagatgctataagtgatgttaagaaaatagctgta
gttaatggtgaaaaaggacttgcagatgctgtaagtgtaggagcaccagctgcacaaaac
aatatgccagtaatacttgctgattctaaaaatggaacagcagttgcagacaaatttata
aaggatgctggaataactcaatcttatgtagtaggtggagagagttcaatttctgaagct
gttaaaaataaactaccaaatagtacaagactaggtggaacagatagaaatgatacaaat
gcaaaagtaataaaagaattttataaaaagacagatttaaaaaatgcttatgtaactaaa
gatggtatgaataaacaagaccaacttatagatgcactagcagtaggtgtattaggtgct
aaaaatcaatcaccagtagttttagttggaaagaacttatcagcttcacaaaaatctcta
gttaactctaagagttttgataagataactaaagttggtgggaatggtaatgagacagca
tttaatgaaatgaagtcattacaagaagtaaaaacagttgaagccaaaacaatttctgaa
ttaaaatcagctatagataaagctactgctaatgatgttataaacttcaaaccaactagt
gaggttaaagaagcatttacaatacaaactgataaagcagtaacagtaaacttaaatggt
acatatacaaagactgtgactatcaacatgcctaatggtgatgtaaataactatgcaaaa
gtggatgatgtagttatagatgatgtaaaagatggaacttttgttaactatggaaaaata
actaacttaaaggttaatgataaaaatggagccaagatagaaaataattctaaaggtgag
attggtagtttaacagtagcatctggagcaagtcaagtaaaagtgactaatggtggtaag
ataactacagttacaaataattctaaagggactactatagataataaaggtacaataagt
agtgttaagggagataattctccaacaataagtggaaatagtccaagttctaactcttca
ggaggaagttcatcaagtggaggttcttcaggaggaagtagtggaggaagttcttcatca
aaggtaggtcaaataaaatttagtgcaacagataaacaaataaaaatggcatcaggagat
aagacagtagatccatcagataacacatatatactaaaattaacaaatgggacagtaaaa
gatggagatgtaaaagctaatgttaaagtagcaggattaccatcaggactagattataca
gcagtaggaaatagatcagcaaatacaataacaattacagtatcaggaacagcaagccaa
tcaatacaaaatgatttaaataatgtaagtgtgctagttaaagcaggagcagtatctgga
acaggagctacagattcaattgcaaatacaacatttgaaattaaaaaatatgtggcgcca
gcaataggtcaattaacttttgatgcaacagataaacaaataaaaatggcatcaggagat
aagacagtagatccatcagatgacacatatgtactaacattaacaaaaggaacagcaaaa
gatggagatgtaaaggctaatgttgaagtaacaggattaccatcagggttagattataca
gcagaaggagattcatcaacaaatacaataacaataacagtatcaagaacagcaagccaa
gcagtacaaactgatttagataatgtaagtgtgttagttaaagcaggagcagtatctgaa
acaactgccacagattcagcagcaaatgcaacatttgaagttaaaaaatatgtggcagcg
ccagcagtaggtcaattaacttttgatgcaacagataaacaaataaaaatggcatcagga
gataagacagtagacccatcagatgacacatatgtactaacattaacaaaaggaacagca
aaagatggagatataaaggctaatgttgaagtaacaggattaccatcagggttagattat
acagcagaaggagattcatcagcaaatacaataacaataacagtatcaggaacagcaagc
caagcagtacaaactgatttagataatgtaagtgtgctagttaaagcaggagcagtatct
gaaacaactgctacagattcagcagcaaatgcaacatttgaagttaaaaaatatgtggca
gcgccagcagtaggtcaattaacttttgatgcaacagataaacaaataaaaatggcatca
ggagataagacagtagatccatcagatgacacatatgtactaacattaacaaaaggaaca
gcaaaagatggagatataaaggctaatgttgaagtaacaggattaccatcagggttagat
tatacagcagaaggagattcatcagcaaatacaataacaataacagtatcaggaacagca
agccaagcagtacaaactgatttagataatgtaagtgtgctagttaaagcaggagcagta
tctgaaacaactgctacagattcagcagcaaatgcaacatttgaagttaaaaaatatgtg
gcagcgccagcagtaggtcaattaacttttgatgcaacagataaacaaataaaaatggca
tcaggagataagacagtagatccatcagatgacacatatgtactaacattaacaaaagga
acagcaaaagatggagatgtaaaggctaatgttgaagtaacaggattaccatcagggtta
gattatacagcagaaggagattcatcagcaaatacaataacaataacagtatcaggaaca
gcaagccaagcagtacaaactgatttagataatgtaagtgtgttagttaaagcaggagca
gtatctgaaacaactgctacagattcagcagcaaatgcaacatttgaagttaaaaaatat
gtggcaccagcaataggtcaattaacttttgatgcaacagataaacaaataaaaatggca
tcaggagataagacagtagacccatcagatgacacatatgtactaacattaacaaaagga
acagcaaaagatggagatgtaaaggctaatgttgaagtaacaggattaccatcagggtta
gattatacagcagagggagattcatcagcaaatacaataacaataacagtatcaggaaca
gcaagccaagcagtacaaactgatttagataatgtaagtgtgctagttaaagcaggagca
gtatctgaaacaactgccacagattcagcagcaaatgcaacatttgaagttaaaaaatat
gtggcaccagcaataggtcaattaacttttgatgcaacagataaacaaataaaaatggca
tcaggagataagacagtagacccatcagatgacacatatgtactaacattaacaaaagga
acagcaaaagatggagatgtaaaggctaatgttgaagtaacaggattaccatcagggtta
gattatacagcagagggagattcatcagcaaatacaataacaataacagtatcaggaaca
gcaagccaagcagtacaaactgatttagataatgtaagtgtgctagttaaagcaggagca
gtatctgaaacaactgccacagattcagcagcaaatgcaacatttgaagttaaaaaatat
gtggcaccagcaataggtcaattaacttttgatgcaacagataaacaaataaaaatggca
tcaggagataagacagtagacccatcagatgacacatatgtactaacattaacaaaagga
acagcaaaagatggagatgtaaaggctaatgttgaagtaataggattaccatcagggtta
gattatacagcagaaggagattcatcagcaaatacaataacaataacagtatcaggaaca
gcaagccaagcagtacaaactgatttagataatgtaagtgtgctagttaaagcaggagca
gtatctgaaacaactgctacagattcagcagcaaatgcaacatttgaagttaaaaaatat
gtggcaccagcaataggtcaattaacttttgatgcaacagataaacaaataaaaatggca
tcaggagataagacagtagacccatcagatgacacatatgtactaacattaacaaaagga
acagcaaaagatggagatgtaaaggctaatgttgaagtaataggattaccatcagggtta
gattatacagcagaaggagattcatcagcaaatacaataacaataacagtatcaggaaca
gcaagccaagcagtacaaactgatttagataatataagtgtgttagttaaagcaggagca
gtatctgaaacaactgctacagattcagcagcaaatgcaacatttgaagttaaaaaacat
gcgtcagatccaatatcaacaataggaaaaatatcttctgggctatcaagtttatttaat
atattaaaataa
DBGET
integrated database retrieval system
