Clostridioides difficile 630: CDIF630_00839
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Entry
CDIF630_00839 CDS
T03885
Symbol
lpdA
Name
(GenBank) glycine cleavage system, dihydrolipoyl dehydrogenase subunit
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
pdc
Clostridioides difficile 630
Pathway
pdc00010
Glycolysis / Gluconeogenesis
pdc00020
Citrate cycle (TCA cycle)
pdc00260
Glycine, serine and threonine metabolism
pdc00280
Valine, leucine and isoleucine degradation
pdc00310
Lysine degradation
pdc00380
Tryptophan metabolism
pdc00620
Pyruvate metabolism
pdc00630
Glyoxylate and dicarboxylate metabolism
pdc00640
Propanoate metabolism
pdc00670
One carbon pool by folate
pdc00785
Lipoic acid metabolism
pdc01100
Metabolic pathways
pdc01110
Biosynthesis of secondary metabolites
pdc01120
Microbial metabolism in diverse environments
pdc01200
Carbon metabolism
pdc01210
2-Oxocarboxylic acid metabolism
pdc01240
Biosynthesis of cofactors
Module
pdc_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pdc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
CDIF630_00839 (lpdA)
00020 Citrate cycle (TCA cycle)
CDIF630_00839 (lpdA)
00620 Pyruvate metabolism
CDIF630_00839 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
CDIF630_00839 (lpdA)
00640 Propanoate metabolism
CDIF630_00839 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CDIF630_00839 (lpdA)
00280 Valine, leucine and isoleucine degradation
CDIF630_00839 (lpdA)
00310 Lysine degradation
CDIF630_00839 (lpdA)
00380 Tryptophan metabolism
CDIF630_00839 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
CDIF630_00839 (lpdA)
00670 One carbon pool by folate
CDIF630_00839 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pdc04147
]
CDIF630_00839 (lpdA)
Enzymes [BR:
pdc01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
CDIF630_00839 (lpdA)
Exosome [BR:
pdc04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
CDIF630_00839 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_oxidored
NAD_binding_8
DAO
Lys_Orn_oxgnase
GIDA
FAD_binding_2
HI0933_like
Trp_halogenase
AlaDh_PNT_C
FAD_binding_3
3HCDH_N
YfdX
Tcp10_C
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
AJP10401
UniProt:
Q189R5
LinkDB
All DBs
Position
869217..870602
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AA seq
461 aa
AA seq
DB search
MKIVVVGGGPGGYVAAIKASMLGADVTVVEKRRVGGTCLNAGCIPTKALLASSGVLNTVK
EAKDFGIEIDGTVKPNFTAIMERKNKVVNQLISGIEFLFEKRGVNLVNGFGKLIDKNTIE
VTKDDGTVETIKADKIILANGSVPVVPRMFPYDGKVVITSDEVLGLEEIPESMLIVGGGV
IGCEIGQFFRALGTEVTIVEMVDQILLNEDKDVAKQLLRQFKKDKIKVITGIGVQTCEVV
DGKAVATLSNGKVIEAQYALVCVGRRPNLDNSGVEDIGIEMERGKVVVNEHLETNVEGIY
AIGDIIDTPFLAHVASKEGIVAVENALGKTKVVDYRAIPRCVYTEPEVAGVGKTEKQLEA
EGVEYNVGQFDFRGLGKAQAIGHFQGFVKVIADKETDKIIGAAVVGPHATDLLTELSLAV
HLGLTVEQVGDAIHPHPSLSEGLMEALHDVHGECVHSVPKL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagtagtagtaggtggtggaccaggaggatatgtagcagctataaaagcttct
atgcttggtgcagatgtaacagttgttgaaaaaagaagagttggaggaacttgcttaaat
gcaggatgtataccaactaaagcacttcttgcttcttcaggagtattgaatactgtaaaa
gaagcaaaggattttggtatagaaatagatggtacagttaagccaaacttcactgccata
atggaaagaaaaaataaagttgtaaaccaattaataagtggtatagagttcttatttgaa
aaaagaggagtaaacttagttaatggttttggaaaattaattgataaaaacactatagaa
gtaactaaagatgatggaacagtagaaactataaaagcagataagataatactagcaaat
ggttctgttccagttgtaccaagaatgttcccatatgatggaaaagttgtaataactagt
gatgaagttcttggacttgaagagatacctgagtctatgttaatagtaggtggtggagtt
ataggatgtgagatagggcagttctttagagccttaggaacagaagtaactatagttgag
atggttgaccaaatactattaaatgaagacaaagatgtagctaaacaactacttagacaa
tttaagaaagataaaattaaggttattacaggtattggagtacaaacttgtgaagtagtt
gatggtaaggctgttgcaactctttctaatggaaaggttatagaagcacaatatgcatta
gtatgtgttggtagaagacctaaccttgacaattctggagtagaagatataggaattgaa
atggaaagaggaaaagtagtagttaatgaacatcttgaaactaatgtagaaggtatatac
gcaataggcgatataatagatactcctttcctagcacatgttgcttctaaagaaggtatc
gtagcagttgaaaatgctttaggtaagactaaggtagtagattatagagcaattccaaga
tgtgtttatactgaacctgaagttgctggtgttggtaagactgaaaagcaacttgaagct
gaaggtgtagaatacaatgtaggtcaatttgattttagaggtcttggaaaagcacaagct
ataggacatttccaaggatttgtaaaagttatagctgacaaagaaactgataagataata
ggtgcagcagtagtaggacctcatgctacagatttattgacagagttgtcacttgctgtt
catctaggattaacagtagaacaagtaggggatgcaatacatccacatccgagtttatct
gaagggctaatggaagcacttcatgatgtacatggagaatgtgttcattctgtacctaaa
ttataa
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