Clostridioides difficile 630: CDIF630_00866
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Entry
CDIF630_00866 CDS
T03885
Name
(GenBank) putative DNA helicase, UvrD / REP type
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pdc
Clostridioides difficile 630
Pathway
pdc03420
Nucleotide excision repair
pdc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CDIF630_00866
03430 Mismatch repair
CDIF630_00866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdc03400
]
CDIF630_00866
Enzymes [BR:
pdc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CDIF630_00866
DNA repair and recombination proteins [BR:
pdc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CDIF630_00866
MMR (mismatch excision repair)
Other MMR factors
CDIF630_00866
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
DEAD
AAA_12
AAA_11
PcrA_UvrD_tudor
Terminase_6N
MJ0207
AAA_14
Motif
Other DBs
NCBI-ProteinID:
AJP10427
LinkDB
All DBs
Position
899536..901599
Genome browser
AA seq
687 aa
AA seq
DB search
MELIITTNIDIRKLNENQLEAVEHIDGPCMILAGPGSGKTRVITYRIANMVVNKNIAPTR
ILAISFTKASSIEMKNRALNLSDDIRLNKVTYGTFHSVFFKILRYFERYNLDSIFDEKSK
RMTIKAILKSLNIENADDDENIGQVINEISYVKNELMDKNEFNSEVLTKDEFLKVYNLYE
EQKSKVNKIDFDDMLIRTYYLLLNNKSALEMVRNVYKYILIDEFQDINKVQFEVLKLICS
PLNNIFAVGDEDQSIYGFRGARPDFLLEFEQYFNNTKKIILDINYRSKSEIVHTANRLID
KNKNRYEKIIKCSQGDGGSVTYISPHDSEEEALYIAREIIDEIQKDYVEYSDFAVIYRTN
IQSRALVDVFMDMRIPFVVKDSVITIYDHWASQDILAYLRIGINPKSNKDWLRIINKPFR
YISKDSINMVKDEKDFITALINKCNLHPKQVKTINDLEIDLSYLNTLNPKNAISYIRTSL
DYDRYVLDYCSNRKIKTNGLVEILNELESSATNFNTVTEFLEHIDRVKTELTENNKNKQT
EGVIFTTMHSAKGLEFRNVYIIGVNEGTIPHEKSYDICKEEKKEEQLEEERRLMYVAITR
AEEKLCISSTLNKYGKKVDKSLFINDIKSPTKKEIDSIDVGDKVYHKKFHEGEIIKKDGI
MFTIKFKDRERILDLKTCLLKNIIYTI
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
gtggagctaataatcacaacaaatatagatataagaaagttaaatgaaaatcaattagaa
gcagttgagcatatagatgggccttgcatgatacttgcagggcctggttcaggtaagacc
agagtaattacatatagaatagccaatatggttgtaaacaaaaacatagcaccaacaaga
atcttggcaataagttttaccaaggcatcttcaatagaaatgaaaaatagagctttgaat
ttaagtgatgacataagacttaataaggtaacctatggtacttttcactctgtatttttt
aaaattctaagatactttgaaagatacaacttagacagtatatttgatgaaaagtcaaag
cgaatgacaatcaaggcaatcctaaaaagtttaaatatagagaatgctgatgatgatgag
aatataggacaagttataaatgaaatttcctatgtaaaaaatgaacttatggataaaaat
gaatttaattcagaagtattaacaaaagatgagtttttaaaagtatacaacttatacgaa
gaacaaaaatctaaagttaataaaatagattttgatgatatgcttataagaacttattat
ttacttttgaacaataagtctgcactagaaatggttagaaatgtgtataaatatatattg
atagatgaatttcaagatataaataaagtacagtttgaagttttaaagttaatttgtagc
ccattaaacaatatatttgcagttggagatgaggaccaaagtatatatggatttagaggt
gctagaccagattttttgcttgaatttgaacaatactttaataatactaaaaaaataata
ttagatataaattacaggtctaaaagtgagatagttcatactgcaaatagacttattgac
aaaaataaaaatagatatgaaaaaatcattaagtgtagtcagggggatggaggaagtgtt
acctatatttctccgcatgattcagaggaagaagccttatatattgccagggaaataatt
gacgaaatacaaaaagattatgtagagtattcagattttgcagtaatttatagaactaat
atacagtcaagagcattagtagatgtatttatggatatgaggattccatttgtagtaaaa
gactcagtaattacaatatatgaccattgggcaagtcaagatatactagcctatttaaga
ataggtattaatccaaaatcaaataaagattggttgagaattataaacaagccttttaga
tatatatccaaagacagtataaatatggttaaggatgaaaaagactttataacagcatta
ataaataagtgtaatcttcatcctaaacaagttaaaacaataaatgatttggaaatagat
ttaagttatttaaatactttaaatcctaaaaatgcaatatcttatattagaactagtctt
gattatgatagatatgttttagattattgtagcaacagaaagataaagactaatggactt
gtagagatattaaatgaacttgagagttcagcaactaattttaatactgttacagagttt
ttagagcatattgatagagtaaagactgagttaacggaaaataacaagaataagcagact
gagggtgtcatatttacaactatgcatagtgcaaaaggattagaatttagaaatgtttat
attataggtgtaaatgaaggaacaatacctcatgaaaaatcatatgatatttgtaaggaa
gagaaaaaagaagaacaattagaagaagaaagaagacttatgtatgttgctattacaaga
gctgaagaaaagttatgtataagctctactttaaataagtatggtaagaaagttgataaa
tcattatttattaatgatataaaatctccaacgaaaaaagaaattgacagtattgatgta
ggggataaggtataccataaaaaatttcatgaaggagaaataattaaaaaagatggaatt
atgtttacaataaagtttaaagatagagagcgaatcttggatttgaaaacttgtttattg
aagaatataatttatactatttaa
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