Clostridioides difficile 630: CDIF630_00975
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Entry
CDIF630_00975 CDS
T03885
Symbol
oppD
Name
(GenBank) ABC-type transport system, ATP-binding component
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
pdc
Clostridioides difficile 630
Pathway
pdc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pdc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CDIF630_00975 (oppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdc02000
]
CDIF630_00975 (oppD)
Transporters [BR:
pdc02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
CDIF630_00975 (oppD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_22
ResIII
ABC_ATPase
AAA_16
Rad17
RsgA_GTPase
nSTAND3
Mg_chelatase
AAA_18
RNA_helicase
NPHP3_N
AAA
AAA_7
ATP-synt_ab
NACHT
AAA_33
AAA_29
FtsK_SpoIIIE
nSTAND1
AAA_5
TsaE
AAA_25
PPV_E1_C
Motif
Other DBs
NCBI-ProteinID:
AJP10531
LinkDB
All DBs
Position
1016740..1017753
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AA seq
337 aa
AA seq
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MEVNNLSVSFKVEEGEVQAVRNVSFNLKKGETLAIVGESGCGKSVLCKSLMRILPYNGYI
KNGEVLLKSSDLVKKSEKEMEDIRGKNISMIFQDPMTSLNPTISIGKQIAEAVIIHQGIS
KSEAKKRAIELIELVGIDNPEKRFKQFPHHFSGGMRQRIVIAIALACNPDVLIADEPTTA
LDVTIQAQIIDLIKDLQHKIGLSIIFITHDLGVVATIADRIAVMYAGKIVEIGTVEDIFY
DPRHPYTWGLLGSLPTLDSQDDYLYNIPGMPPNLLNPPKGDAFAIRNKNALKIDYEKEPP
MFKINDTHSAATWLLHPDAPEVDVPVRVNCGRVISNE
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
ttggaggttaataatctatctgtaagttttaaagtagaagaaggagaagttcaggctgta
agaaatgtatcttttaatctaaaaaaaggtgagacattggctatagttggagaatctggt
tgtgggaaatctgtactgtgtaagagtttgatgaggatactcccatacaatggatatatt
aaaaatggagaggttttacttaaatcaagtgatttggttaagaagtctgaaaaagagatg
gaagatataagaggaaagaatatatcaatgatatttcaagaccctatgacatctctcaat
ccaactatatcaataggaaagcaaattgcagaagctgtaatcattcatcaaggtataagt
aaaagtgaggcaaaaaagagagccatagagcttattgaattggttggaattgataatcct
gagaaaagatttaaacaatttccacatcatttttcaggtggaatgagacaacgtatagta
atagctatagcacttgcttgtaatccagatgtattgattgctgatgaacctacaactgct
ttagatgtaactatacaagctcaaataattgatttaataaaggatttacaacataaaata
ggtttgtcaataatatttataactcatgatttaggagtagttgcaactatagctgataga
atagcagttatgtatgcaggaaagattgtagaaataggaactgtagaggatatattttat
gaccctagacatccatatacttgggggttgttgggttcattacctactttagattcgcag
gatgactatttatataatatacctggaatgcctccaaatttattgaacccaccaaaagga
gatgcttttgcaataaggaataaaaatgcacttaagatagattatgaaaaagagccacca
atgtttaaaattaatgatacacatagtgcagcaacttggttattgcacccagatgcacct
gaagtagatgtaccagttagagtaaattgtggaagggtgatttctaatgaatag
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