Clostridioides difficile 630: CDIF630_01228
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Entry
CDIF630_01228 CDS
T03885
Symbol
ywjA
Name
(GenBank) ABC-type transport system, multidrug-family ATP-binding / permease protein
KO
K06147
ATP-binding cassette, subfamily B, bacterial
Organism
pdc
Clostridioides difficile 630
Brite
KEGG Orthology (KO) [BR:
pdc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdc02000
]
CDIF630_01228 (ywjA)
Transporters [BR:
pdc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
CDIF630_01228 (ywjA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
DEAD
AAA_22
AAA_24
AAA
AAA_18
ABC_ATPase
ABC_membrane_3
DUF1538
Rop-like
PigN
IstB_IS21
SART-1
AAA_25
TsaE
AAA_28
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AJP10773
UniProt:
Q18AT8
LinkDB
All DBs
Position
1260584..1262284
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AA seq
566 aa
AA seq
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MIKQFVKYYKPYKKIFTLDLIAAFLFSLCDLVYPMITRNIMDDVVPNKNLRMLVVFAVAL
ILIFIAKAGLNYFMQYWGHVIGVDMQADMRNEVFTHLQRLPNTYFDNNKSGVTMSRIVND
LMDITELAHHGPEDLFISIVMLVGSFFILIDINIPLTLIIFAILPFIIWFAIAKKDKMNI
AFMKSRVTIGDVNATLENSIAGMKVTKSFCTEKEELNKFVRSNKLFRRARQDSYKVMAEY
YSGMNLYMDILEWVVVIAGGYFTYIGKITLGDFAAYILYVKMFIQPMKKLINFTEQYQNG
MTGFKRFIEIMEQDHQKEAKNPIELENVKGDIEIENISFTYEDKTQVLDNLSLSIKAGKT
IALVGPSGGGKTTLCNLLPRFYEFDKGDIKIDGKSIKDVSLKSLRKNIGIVQQDVFLFTG
TIRDNILCGNPNATDEEMIAAAKKARIHDFVETLPDGYDTYIGERGVKLSGGQKQRISIS
RIFLKNPPIIILDEATSALDNVTEREIQESLEELSKDRTNLVVAHRLTTIKNADEIIVLT
DKGIEERGTHEELVNKNGVYSRLHNN
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgataaaacaatttgtcaaatattataagccatataagaaaatttttacactagacctt
atagcagcttttctattttccttatgtgatttagtttatcctatgataactagaaatata
atggatgacgttgttccaaataaaaacttaagaatgttagtagtttttgcagtagcactt
atacttatatttatagcaaaagcagggcttaactattttatgcagtattggggacatgtt
attggtgtagatatgcaagctgatatgagaaatgaggtatttacacacttacaaagactt
ccaaatacgtattttgataataacaaatctggagtaactatgtctagaatagtaaatgat
ttaatggatataacagaacttgcacatcatgggcctgaagatttattcatttctatagta
atgttggttggttcattctttatacttatagatataaatattcctcttacgcttataata
tttgctatattaccgtttataatttggtttgcaatagctaaaaaagataagatgaatatt
gcttttatgaagagtagagttactataggtgatgtaaatgctactttagaaaatagtata
gcaggtatgaaggtaactaagtctttttgtactgagaaagaagagttaaataagtttgta
agaagcaataaattatttagaagagcaagacaagattcttataaggtaatggcagaatat
tactctggtatgaatttatacatggatatcttagagtgggtagttgtaatagctggtggt
tattttacttatataggaaagattactttgggtgattttgctgcttatatactatatgta
aaaatgtttatacaacctatgaaaaaattaataaactttacagagcaatatcaaaatggt
atgacaggttttaaaagattcatagagataatggaacaagaccatcaaaaagaagctaaa
aatcctattgaacttgaaaatgtaaaaggtgacattgagatagaaaatatatctttcaca
tatgaagataagactcaagttttggataatttaagtttatctataaaagctggtaagact
atagcattagttggaccttctggaggaggaaagactacattatgtaatctattgccaaga
ttttatgaatttgataagggtgatataaaaattgatggaaagagtataaaagatgttagt
ttaaaatcattgagaaaaaatataggtatagttcaacaagatgtatttttatttacagga
actataagagataatattctttgtgggaaccctaatgctacagatgaagaaatgatagct
gctgctaaaaaagctagaatacatgactttgtagagactttgccagatggatatgatact
tatataggagaaagaggcgtaaaattatcaggtgggcaaaaacaaagaatttcaatttca
agaatctttttaaagaatcctccaataataatattggatgaggctacatctgctttagac
aatgtaacagaaagagaaattcaagagtctttagaggaattaagtaaagatagaacaaat
ttagttgttgcacatagattgactactataaaaaatgctgatgaaatcatagtattgacg
gataaaggaattgaagaaagaggtactcatgaagagctagtaaacaaaaatggagtatat
agtaggttacacaataactag
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