Clostridioides difficile 630: CDIF630_01275
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Entry
CDIF630_01275 CDS
T03885
Symbol
polA
Name
(GenBank) DNA polymerase I (POLI)
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pdc
Clostridioides difficile 630
Pathway
pdc03030
DNA replication
pdc03410
Base excision repair
pdc03420
Nucleotide excision repair
pdc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CDIF630_01275 (polA)
03410 Base excision repair
CDIF630_01275 (polA)
03420 Nucleotide excision repair
CDIF630_01275 (polA)
03440 Homologous recombination
CDIF630_01275 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdc03032
]
CDIF630_01275 (polA)
03400 DNA repair and recombination proteins [BR:
pdc03400
]
CDIF630_01275 (polA)
Enzymes [BR:
pdc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CDIF630_01275 (polA)
DNA replication proteins [BR:
pdc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CDIF630_01275 (polA)
DNA repair and recombination proteins [BR:
pdc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CDIF630_01275 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CDIF630_01275 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
XPG_I
HHH_2
DUF5069
Motif
Other DBs
NCBI-ProteinID:
AJP10819
UniProt:
Q18AY7
LinkDB
All DBs
Position
1311198..1313846
Genome browser
AA seq
882 aa
AA seq
DB search
MEKKLIIIDGNSIINRAFYALPEMNNKEGLKTNAIYGFTTMLFKMIDIYKPTHISVAFDR
KAPTFRHLEYKEYKAGRKGMPDELAEQLQPLKDLLDKFRINRLEIDGYEADDIIGTVSKK
AEENGYKVYIVTGDKDAIQLASDNTTTLITKKGVGEVEEYNFNSVIEKYEMTPTQFIDLK
GLMGDKSDNIPGVPGIGEKTGIKLIKEFSSIENLIENTDKLKGSVKKKIEENKEIAIQSK
RLATIIRDVPIEVDLDSMIFGDYDKDELLDKFRYFGFTSLLSRLVDLVDSDDTEHVEEKI
EILKLKDIEKFIDEVNKKGQVILKTVRGQGNILEKNIIYIFISVDGEKIYYVDSNEVSKL
DSIFSNNEIKKYGYNLKDDYISLKPYNINLENMYFDITIAEYLIDSTSSTSYDCSAIAMK
YLSKKVKSKEELLGKGVKSKNYEDLEFEDLAEYMGQIICTVKETVPMMERSLMDMSMDGL
FYHVEMPLVEVLGHMEYEGIKVDKSILDELSVEFKEIIATLEKEIYELSGEPFNINSPKQ
LGVILFEKLELPIIKKTKTGYSTNADVLEKLRDKHPIIDKITEYRQIVKLNSTYVEGLLN
IINPESNRIHSSFNQTITTTGRISSTEPNLQNIPIKMEMGRKIRKVFIADDNCKLVDADY
SQVELRVLAHMSQDENMIEAFKHHEDIHTKTASQVFNVPMEDVTSELRGAAKAVNFGIIY
GKSDFGLADDLNIPVPKAKEYIESYFAKYHKIKEFMDTTVEKASEDGYAVTILNRRRYIP
EIKSSNFMERNRGKRFAMNAPIQGSAADIIKIAMINVHKKLEENNLKSKLILQVHDELIV
EAIDDEIDIVKKIVKEEMENAVNMDVHLDVDLNVGSSWYETK
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaaaaaattaattataatagatggaaattcaataataaatagagctttttatgct
cttccagaaatgaataataaagaagggctaaagaccaatgcaatatatggatttacaaca
atgctatttaaaatgatagatatatataaaccaacacatataagtgtagcatttgacaga
aaagcacctacatttagacatttagaatataaagagtataaggctggaagaaagggaatg
ccagatgaactggcagaacaattacagccattaaaagaccttttagataaatttagaata
aatagattggaaatagatggctatgaggcagatgatattataggtactgtttctaaaaaa
gcagaagaaaatggatataaggtatacatagtaactggagacaaagatgctattcaactt
gcttcagacaatacaactactcttataacaaaaaaaggagttggagaagttgaagaatac
aactttaattctgtaattgaaaaatacgagatgactccaacacaatttatcgatttaaag
ggtcttatgggagacaagtctgataatatacctggagtacctggaataggtgaaaaaaca
ggtataaagcttataaaagagttttctagtatagagaatctaatagagaatacagataag
cttaaaggtagtgtaaaaaagaaaatagaggaaaacaaagaaatagctattcaaagtaaa
agacttgcaacaattataagagatgtgccaatagaagtggatttagatagtatgattttt
ggcgattatgataaagatgaacttttagataaatttagatactttggatttacaagtctc
ttatcaagattagttgatttggtcgattcagatgacacagaacacgtagaagaaaaaata
gaaatattaaaattaaaagatatagaaaaatttatagatgaagtaaacaaaaaaggacaa
gttattttaaaaactgttagaggacaaggtaatatacttgaaaaaaatataatatatatt
tttataagtgtagatggagaaaaaatatattatgtagattcaaatgaagtgtcaaagtta
gatagtatattttcaaataatgaaattaaaaagtatggatataatttaaaagatgattat
atatctttaaaaccatataatataaacttagaaaatatgtattttgatataacaatagct
gagtacttaatagattcaacttcatctacctcatatgattgtagtgcaatagctatgaag
tatttatcaaaaaaggttaaatcaaaagaagaattattaggaaagggtgttaaatctaaa
aactatgaggatttagaatttgaggatttagcagagtatatgggtcaaataatatgcaca
gttaaagaaacagttcctatgatggaaagaagtctaatggatatgagtatggatggtctt
ttttatcatgtagagatgcctttagtagaagtcttaggtcatatggagtatgaaggtata
aaagtagacaaaagtatattggatgaattgagtgttgaatttaaagaaataatagctaca
ttagaaaaggaaatttatgaattatcaggagagccattcaatataaattcaccaaaacaa
ttgggtgttatattatttgaaaaattagagcttccaataattaaaaaaactaaaactgga
tattcaactaatgcagatgttttagaaaaattaagagataagcatccaataatagataag
ataactgagtatagacaaatagtaaagttaaattctacttacgttgaaggacttttaaat
ataataaatccagaaagtaatagaatacattcatcatttaatcaaactataacgactaca
ggaagaatttcatctacagaaccaaatcttcaaaatatacctataaaaatggaaatgggt
agaaaaataagaaaagtgtttattgcagatgataactgtaagttggttgatgccgattac
tcacaagtagagctaagagttcttgcacatatgagtcaggatgaaaatatgatagaagca
tttaaacatcatgaagatattcataccaaaacagcttcacaagtttttaatgttcctatg
gaagatgttactagtgaattgagaggtgcagctaaagctgtaaactttggtattatatat
ggtaaaagtgactttggtctagctgatgatttaaatatacctgttccaaaggcgaaagaa
tatatcgaaagttattttgctaaataccataaaataaaagagtttatggacacaacagta
gaaaaggctagtgaggatggatatgctgtaacaattttaaacagaagaagatatatacca
gaaataaagtcaagcaattttatggaaagaaatagaggaaagagatttgcaatgaatgca
ccaatacaaggaagtgcagcagatataataaaaattgctatgataaatgttcataaaaaa
ttggaagagaacaatttgaaatcaaaacttatactacaagttcacgacgagttgatagtt
gaagcaattgatgatgaaatagatatagttaagaaaatagtaaaagaagaaatggaaaat
gctgtaaatatggatgttcacttagatgtagatttaaatgtaggtagttcttggtatgag
acaaagtag
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