Clostridioides difficile 630: CDIF630_01354
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Entry
CDIF630_01354 CDS
T03885
Symbol
ispA
Name
(GenBank) geranylgeranyl pyrophosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
pdc
Clostridioides difficile 630
Pathway
pdc00900
Terpenoid backbone biosynthesis
pdc01100
Metabolic pathways
pdc01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pdc00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
CDIF630_01354 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pdc01006
]
CDIF630_01354 (ispA)
Enzymes [BR:
pdc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
CDIF630_01354 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
CDIF630_01354 (ispA)
2.5.1.29 geranylgeranyl diphosphate synthase
CDIF630_01354 (ispA)
Prenyltransferases [BR:
pdc01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
CDIF630_01354 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
AJP10897
UniProt:
Q18B64
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All DBs
Position
1387798..1388685
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AA seq
295 aa
AA seq
DB search
MEFKQCLKEKASFVEKVLKEYMPKEEGYQKTVIEAMNYSLSAGGKRLRPILTLEACKIVG
GNEDEAIPFAIAIEMIHTYSLIHDDLPALDNDDLRRGRPTNHKVYGEAMGILAGDALLNY
AFEVMLAGSINKENPEKYLKAINEIAKGAGIYGMIGGQVVDVESENKQIEKEKLDYIHMN
KTAAMMVGCMRAGATIGGANSEQMEEITKYAKNIGLSFQIVDDILDIVGDEAKLGKKVGS
DIENHKSTYPSLLGLDKSKEIAHNLIDEAKKSIEKLSDDVDFLKGLAEYIIDREY
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
ttggaatttaaacaatgtctaaaagaaaaagcaagttttgtagaaaaagtacttaaagaa
tatatgcctaaagaagaagggtatcaaaaaactgttattgaagctatgaactatagctta
agtgctggaggtaaaagattaagaccaatacttacattggaggcttgtaaaatagttgga
ggtaatgaagatgaagctattccttttgctattgcaattgaaatgatacatacatattca
ctaatacatgatgatttgccagctcttgacaatgatgatttaagaagaggaagaccaaca
aatcataaagtatatggagaagctatggggattttagcaggagatgctttgttaaactat
gcttttgaagtaatgcttgcaggctcaatcaataaagaaaatccagaaaagtatctaaaa
gctataaatgaaattgccaaaggtgctggtatatatggaatgataggtggtcaagtagta
gatgtagaaagcgaaaacaaacaaattgaaaaagaaaaattagattatatacatatgaat
aaaactgctgcaatgatggtaggctgtatgagagcaggagctactataggtggagcaaat
tctgaacaaatggaagaaataactaaatatgcaaaaaatatcggattatcattccagata
gtagatgatatactagacatagtaggagatgaagctaagttaggtaaaaaggttggaagt
gatatagaaaatcataagtcaacatacccatctcttttaggtttagataaatctaaagaa
attgcacataatttgattgatgaagcaaagaaaagtatagaaaaattatctgatgatgta
gattttttaaagggattggctgaatatataatagatagagaatactaa
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