Clostridioides difficile 630: CDIF630_01481
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Entry
CDIF630_01481 CDS
T03885
Symbol
selU
Name
(GenBank) tRNA 2-selenouridine synthase
KO
K06917
tRNA 2-selenouridine synthase [EC:
2.9.1.3
]
Organism
pdc
Clostridioides difficile 630
Brite
KEGG Orthology (KO) [BR:
pdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdc03016
]
CDIF630_01481 (selU)
Enzymes [BR:
pdc01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.3 tRNA 2-selenouridine synthase
CDIF630_01481 (selU)
Transfer RNA biogenesis [BR:
pdc03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
CDIF630_01481 (selU)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhodanese
AAA_18
AAA_22
AAA_16
DUF6953
Motif
Other DBs
NCBI-ProteinID:
AJP11023
UniProt:
Q18BI8
Structure
PDB
PDBj
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All DBs
Position
1521331..1522389
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AA seq
352 aa
AA seq
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MSVIKIEKALKLDKVIFVDVRTEGEYEEDHILNAINMPLFKNNEHNEVGTIYKMQGKHEA
IQKGFDYVSYKLKDIYLQAAELALNYDNIVIYCARGGMRSGSIVNLLSSLGVNVYQLEGG
YKAYRNFVLEYLRHVMDTKNFVSVHGLTGTGKTDLLHLLDENGIDVLDLEGIAKNSGSTF
GFITFDKKPPSQKNFETKLFESIFFSKENYIFVESESKRVGSVTVPNEIFEAMTREGHHI
LLECDIENRVDRLCRDYIYDKDEGNILILKECINKFRKRLGNKVVDDYIDLLESGEYKEL
VKRYLLEYYDPLYMHSVEKYKYSKIINFNDTQKALEDVIDLYESILEGESEC
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
ttgtcagttataaaaatagaaaaagcacttaagctagataaagtaatatttgtagatgtg
agaactgaaggagaatatgaagaagaccatatattgaatgcaatcaatatgcctcttttt
aaaaataatgaacataatgaagttggaacaatttataagatgcagggaaaacatgaagca
atacaaaaagggtttgactatgtatcgtataaattaaaggatatatatttacaagcagca
gaacttgcattaaattatgataatattgtcatatattgtgcaagaggcggaatgagaagt
ggaagtatagtaaatttattatcatcattaggtgtaaatgtatatcaacttgaaggtgga
tataaggcttatagaaattttgttttagagtatttaaggcatgtaatggatacaaaaaac
tttgtatctgttcatggattgactggtacaggaaagactgatttgttacatttattagat
gaaaacggaatagatgtactggatttagaaggcatagctaaaaacagtggttctaccttt
ggttttataacttttgataaaaagccaccatctcaaaagaactttgaaacaaaactattt
gaaagtatatttttttcgaaagagaattatatatttgtcgagagtgaaagcaaacgagtt
ggaagtgttacagttccaaatgaaattttcgaggcaatgacacgagaaggacatcatata
ttattagaatgtgatattgaaaatagagttgatagactttgtagagattatatttatgat
aaagatgaaggtaatatattgattttaaaagaatgtataaacaagtttagaaaaagattg
ggtaataaagtagtagatgattatattgatttattagaatcaggtgaatataaagaactt
gtaaaaagatatcttttagaatactacgacccactttatatgcattcagtagagaaatat
aagtatagtaagattataaattttaatgatacacaaaaagctttagaagatgttatagac
ttatatgagagtatattggaaggagaaagtgaatgttaa
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