Clostridioides difficile 630: CDIF630_02007
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Entry
CDIF630_02007 CDS
T03885
Name
(GenBank) putative diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pdc
Clostridioides difficile 630
Pathway
pdc00300
Lysine biosynthesis
pdc00470
D-Amino acid metabolism
pdc01100
Metabolic pathways
pdc01110
Biosynthesis of secondary metabolites
pdc01120
Microbial metabolism in diverse environments
pdc01230
Biosynthesis of amino acids
Module
pdc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pdc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CDIF630_02007
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CDIF630_02007
Enzymes [BR:
pdc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
CDIF630_02007
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AJP11529
UniProt:
Q187B7
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All DBs
Position
2075874..2077085
Genome browser
AA seq
403 aa
AA seq
DB search
MYSNEDYKFIEENAPCYIYDETNIIEKCKELKNNILGFDFLYSIKTNPYNKIVKSIAEQG
FGADASSTNEVMISSKCGVSKDDIYYSSPGKTEIDIETVLDKCIIIADSITEIELINKIS
KKHNQKVKIGIRINPDFTMDDDSAKSSKFGIDIEDMSSVFKMLSMCDYVSVVGIHIHIKS
QVLDFEKLGHYYEKCFFIALNLNKSKYINIEFINFGSGLGVAYDNLRENPLNLKELSKLT
QKIAFTNSNTLKSRLLIESGRFIVCKSGNYYVKIVDIKVSRGKKYLIVKNGLNGFMRPII
SNLIENITCGVELEGQEPLYTSNHAFSLSVLNNLKEEEYVNVVGNLCTSLDVIANNVKLK
KANIGDLISISNAGSYSYSLSPLLFSSYEFPKQYYKRKDGYIE
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgtactcaaatgaagactataaatttatagaagaaaatgcaccatgttatatatatgat
gagactaatataattgaaaaatgtaaggaattgaaaaataatattttaggttttgatttt
ttatattctataaaaacaaatccatataacaaaattgtaaaaagcattgcagagcaaggt
tttggagcagatgcttcttcaactaatgaagttatgatttcatcaaaatgtggagtttct
aaagatgatatttattattcatcaccaggcaaaacagagattgatatagaaactgtttta
gataaatgcataattattgcagatagtattacagaaatagaacttataaataagatatct
aaaaagcataatcagaaagttaaaataggaataagaataaatcctgattttactatggat
gatgatagtgctaaatcaagcaaatttggtatagatatagaagatatgagcagtgttttt
aagatgttaagtatgtgtgattatgtatctgtagttggtattcatatacatattaaatct
caggtattggattttgaaaagttaggacattattatgaaaaatgtttttttatagcttta
aatttaaataaaagtaagtatattaatattgaatttataaattttggtagtggacttgga
gtagcttatgataatcttagagaaaatccacttaatcttaaagagctttcaaaattaact
caaaagattgcttttactaattcaaacacactaaaatcaagacttcttattgaatcagga
cgtttcatagtttgtaaatcaggtaattattatgttaaaattgtagatattaaagtatca
agagggaaaaaatatcttattgtaaaaaatggacttaatggatttatgagacctattatt
tctaatttaattgaaaatattacttgtggagtagaattagaaggtcaagagccattatat
acatcaaatcatgccttttctctttcagtattaaataatttaaaagaagaagagtatgta
aatgttgttgggaatctctgtacatcattagatgtaattgcaaataatgttaaattgaaa
aaagcaaacataggagatttgatttcaattagtaatgctggaagttactcctattcttta
tcaccgctattattttcaagttatgaatttcctaaacaatattataaaagaaaagatgga
tatattgagtaa
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