Clostridioides difficile 630: CDIF630_02051
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Entry
CDIF630_02051 CDS
T03885
Name
(GenBank) putative conjugative transfer protein
Organism
pdc
Clostridioides difficile 630
Pathway
pdc03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pdc00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CDIF630_02051
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
T4SS-DNA_transf
TraG-D_C
TrwB_AAD_bind
HigB-like_toxin
UvrD-helicase
DEAD
AAA_19
FtsK_SpoIIIE
DUF3970
Motif
Other DBs
NCBI-ProteinID:
AJP11572
LinkDB
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Position
2124849..2126630
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AA seq
593 aa
AA seq
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MIDKILKDIKGLFKVQDKAKFLKQNIPYLAFFYVGNIFSHHVRAYTGGDVIDKIFQGILE
LNTMSFLPSFHPTDILIGVGVATLIKFIAYTKGKNAKKFRQGKEYGSARWGTRKDIEPYI
DEKFQNNILLTQTERLTMNGRPKNPKYARNKNVLVIGGSGSGKTRFYVKPNLMQMHSSYC
VTDPKGTIVLECGKMLEDNGYEIKILNTINFKKSMKYNPFAYLRSEKDILKLVQTIIANT
KGEGEKAGEDFWVKAEKLYYTALIGYIFYEAPREEKNFATLLDMIDASEVREDDETYMNP
IDRLFEALEKKEPTHFAVKQYKKYKLAAGKTAKSILISCGARLAPFDIRELRDLMGEDEL
ELDTLGDRKTALFVIISDTDDTFNFVVSIMYSQLFNLLCDKADDVYGGRLPVHVRCLLDE
FANIGLIPKFEKLIATIRSREISASIILQAQSQLKAIYKDNADTIVGNCDSTLFLGGKEK
TTLKELSETLGKETIDLYNTSETRSNQKSFGLNYQKTGKELMSQDEITVMDGGKCIFQLR
GVRPFLSDKYDITKHKNYKLLEDYDKRNLFDIESYIKRKGKVKMNRHTVITRL
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgatagataagatactaaaagacatcaaaggcttatttaaggtgcaagataaggcaaag
tttctaaagcagaacattccctatcttgcatttttctatgttggcaatatcttttctcat
catgtaagagcatatactggtggcgatgtaatagacaaaatatttcaaggtatattggaa
cttaacaccatgagctttcttccaagttttcatccaactgatattctaataggcgtagga
gtagctactttaatcaaattcattgcctatacaaaagggaaaaatgcgaaaaagtttagg
cagggaaaagagtatggctcggcaagatggggaactagaaaagatattgagccgtacatt
gatgaaaagtttcaaaacaatatcttgctaacgcaaacagaacgattaactatgaatggt
agaccgaaaaatcccaagtatgcaagaaataaaaatgtacttgtcataggaggatctgga
agtggcaagacaaggttttatgtcaagccgaacctaatgcaaatgcacagtagctattgc
gtaacagatccaaagggaacgatagtccttgagtgtggcaaaatgcttgaagataacgga
tatgagataaaaatccttaataccattaactttaaaaagtctatgaaatacaatccattc
gcctacctccgcagtgaaaaagacatacttaaattggtgcagacaatcattgcaaacact
aagggagagggtgaaaaagcgggggaagatttttgggtcaaagccgaaaaactctattat
acagctctgattggatatatcttctatgaagctccaagggaagaaaagaactttgcaaca
ctccttgatatgatagacgcttcagaagttagagaagatgatgaaacatatatgaatcct
attgataggttatttgaagcattggaaaagaaagaacctacgcactttgcagtaaagcaa
tataaaaaatacaaacttgctgccggaaaaacagcgaaatctattcttatctcttgtggt
gcaaggcttgctccatttgatattagggaacttagggacttgatgggggaagatgaactt
gagcttgatacactcggagatagaaaaacggcactctttgttattatctctgatacagat
gatacctttaactttgtagtgtctattatgtattcgcagttatttaatctcttatgtgat
aaggcagatgatgtatatggcggacgattacctgtccatgtgaggtgtctacttgatgag
ttcgctaatatcggcttaattcctaagtttgagaagttaattgcaacaatccgttcaaga
gagatttcagcaagtataatacttcaagcacaatctcagttaaaagcaatctacaaagat
aatgcagatacaattgtaggtaattgtgatagcaccttgtttcttggcgggaaggaaaag
actacattaaaagagctttctgaaacacttggaaaggaaacgatagacctttacaatacc
tcggaaacaagaagcaatcaaaagagctttggattgaattatcaaaagacaggaaaggag
ctaatgagccaagatgagataacagtaatggacggtggaaaatgtatatttcagcttaga
ggtgttcgaccttttctatcagataaatacgatattacaaagcataagaattacaagctc
cttgaggactatgacaagaggaatttgtttgatatagagagctacattaagcgtaaaggg
aaagtgaaaatgaatagacatactgtaattacaagattgtaa
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