Clostridioides difficile 630: CDIF630_02195
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Entry
CDIF630_02195 CDS
T03885
Symbol
miaB
Name
(GenBank) tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
pdc
Clostridioides difficile 630
Brite
KEGG Orthology (KO) [BR:
pdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdc03016
]
CDIF630_02195 (miaB)
Enzymes [BR:
pdc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
CDIF630_02195 (miaB)
Transfer RNA biogenesis [BR:
pdc03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
CDIF630_02195 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
AJP11712
UniProt:
Q187U6
LinkDB
All DBs
Position
complement(2274389..2275825)
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AA seq
478 aa
AA seq
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MSKRKQVTIPIEKIQEQDKYIEQIHRQNEEYFNRTGKRKLVFTQTFGCQMNEHDSEKLCS
MLEEMGYQMSMMVEESDLIIYNTCAVRENAELKVYGNLGQLKHLKGKNPDMKIAVCGCMM
QQPHVVEELRKKYKHVDLIFGTHNLYKFPQLLTESINSDKMLVDVWDVDGEVIEGLRSNR
KFELKAFVNIMYGCNNFCTYCIVPYTRGRERSRTPEDIINEIKELVANGTKEITLLGQNV
DSYGKTLENPVSFSELLRKVNDIEGIERVRFMTSHPKDISDEVIYAIRDCDKVCEFLHLP
IQCGSSSLLKKMNRHYTKEYYLEIIEKAKKEVPGIAFSTDLMIGFPGETEEDLLDTLDVV
EKVRYDSAFTFIYSKRQGTPAAKMENQIPEDIKHDRFNRVLEAVNRISAEINDGYKDRIV
EVLVEGRSKNNENKFAGRTRQNKLVNFEGGNDDLIGKLVMVKITEPRTFSLNGILVNN
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaaaagaaaacaagtaacaatacctatagagaaaatacaagaacaagataaatat
atagaacaaatacacagacaaaatgaagaatacttcaacagaactggaaagagaaaactc
gtgtttactcaaaccttcgggtgtcaaatgaatgaacatgattcagaaaaattatgttca
atgttagaagagatgggataccaaatgtcaatgatggttgaagaaagtgatttaataata
tataacacctgtgcagttagagaaaatgcagagctaaaagtgtatggtaacttaggacaa
ttaaaacatctaaaaggaaaaaatccagatatgaaaatagctgtatgtggatgtatgatg
caacaaccacatgttgtagaggaattaagaaaaaaatataaacatgtagaccttatattt
ggaacacataatctatataaatttccgcaattacttacagaatcaataaattctgacaaa
atgttagtggatgtatgggatgtggatggagaagtaatagaaggtcttagaagtaataga
aaatttgaattaaaagcatttgtaaatataatgtatggatgcaataatttctgcacatat
tgtatagtcccatacacaagaggaagagaaagaagtagaactcctgaagatataattaac
gagataaaagagcttgttgcaaatggaacgaaagaaatcactttacttggacaaaatgta
gattcttatggtaagacacttgaaaatccagtttcattctcagaacttttaagaaaagtg
aatgatatagaaggaattgaaagggttcgatttatgacatctcatccaaaagatatatct
gatgaagtaatatacgcaattagagattgtgataaggtgtgtgagtttttacatctacca
atacaatgtggaagcagtagccttttgaaaaaaatgaatagacattatacaaaggaatat
tatttagaaataatagaaaaagctaaaaaggaagttccaggtattgctttttctacagac
ttaatgattggtttcccaggagaaacagaagaagatttattggacactttagatgtggtt
gaaaaagttagatatgattcagcttttacatttatttattctaaaagacagggaactcct
gctgctaaaatggaaaatcaaataccagaagatataaagcatgatagatttaatagggtg
ttagaagctgtaaataggatttctgcagaaataaatgatggatataaagatagaatagtt
gaagttctagttgaaggaagaagtaaaaataatgaaaataagtttgctggtagaactaga
caaaataaactcgtaaatttcgaaggtggaaatgatgatttaattggtaaattagttatg
gtaaaaattactgaacctagaactttttcattaaatgggatattagtaaataattaa
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