Clostridioides difficile 630: CDIF630_02214
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Entry
CDIF630_02214 CDS
T03885
Name
(GenBank) transcriptional regulator, AraC family
Organism
pdc
Clostridioides difficile 630
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Gene cluster
GFIT
Motif
Pfam:
PocR
HTH_18
HTH_AraC
Cupin_2
AraC_binding
Polysacc_synt_C
GPI
Cupin_1
MannoseP_isomer
Motif
Other DBs
NCBI-ProteinID:
AJP11728
UniProt:
Q187V9
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Position
complement(2288918..2290573)
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AA seq
551 aa
AA seq
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MEYFSESNNEVQKFDWGEVMWIHEPSKTQFNRLSAGIVRFFPGNYQEKHFHLSEEQLLYV
IQGEGIQIIDGKKVNIKETSIVYCPPYSEHEIINTGKIDLVILITYVPHKFSSLRQIPIV
FSENNIQELVNVNIIENLANQISNILKLRISVYDLKYKEIFETKKENKFCDICKNIKQCT
KKLVKSINNDNFEKVYHCEYGVSSLEIPIVLEENIVGYIECGNFIVYKSIDIDKNLSELS
SSSGIDIKYINKIYNEFPLNPKSRLYVLKENLLMMSEFIQEIAKRNFFENQLSIKDEEIL
KSRKENIRLEEALKKANSRLLEEEYIINPIDMFNNSSKEYPFELELYIEKEIKNMNLEGV
YNLIDTNKLRYNDVRDTIQEMIFVLSRTVLRDLEDLKLISYLRNKYNKKISLVNSDEDLW
NVLFEFSKECIDKNRAFWRKDKGNLIENINEYIKKYYKENINLNSISDVFFISPNYLSSI
FNERNKVSITEYINLLRIEESKKYLLDRSMSISDICKKVGFNNSSYFSQIFKKFNSITPN
EYRKNMLDNKY
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggagtattttagtgagtcaaataatgaagtacaaaaatttgattggggagaggttatg
tggatacacgaaccatcaaaaacacaattcaatagacttagtgctggaattgtaagattt
tttccgggaaactaccaagaaaagcattttcatttaagtgaagaacagcttttatatgtg
attcagggagaaggaatacaaataattgatggtaaaaaggtcaatataaaggaaacatct
atagtttattgcccaccatattcagaacatgaaattataaacactggtaaaattgattta
gtaatattaattacttatgttcctcataaattttcgagtttgagacaaatacctatagta
ttttctgaaaacaatatacaggagttagttaatgtaaacataattgaaaatcttgcaaat
caaatatctaatatattgaagcttagaatatctgtatatgacttaaagtataaagaaata
tttgagactaagaaagaaaataaattttgcgatatttgtaaaaatataaaacagtgtact
aaaaaacttgttaaaagcataaataatgataactttgaaaaagtgtaccattgtgagtat
ggtgtttccagtttagagatacctatagtattagaagaaaatatagttggatatatagaa
tgtggtaattttatagtatataagtctattgatatagataaaaatttatctgaattatca
agtagttctggtattgatataaaatacataaacaaaatttacaatgaatttccattaaat
cctaaaagtagattatatgtattaaaagaaaatttattaatgatgtctgaatttattcag
gaaatagctaagaggaatttttttgaaaatcaacttagtataaaagatgaggagatattg
aagagtagaaaagaaaatataagacttgaagaggcacttaaaaaagcaaatagtagatta
ttagaagaagagtatattattaatccgatagatatgttcaataattcttcaaaagaatat
ccctttgaattagaactttatattgaaaaagaaattaaaaatatgaatttagaaggtgtt
tataatctaatagatacaaacaaattaagatataatgatgttagagatactattcaggaa
atgatatttgtattgtctagaacagtgcttagagatttagaggatttaaaacttatatct
tatttaagaaataaatataataaaaaaatatcacttgtaaacagtgatgaagatttatgg
aatgtattatttgaattttccaaagagtgtattgataagaatagagcattttggagaaaa
gataaaggaaatctaattgaaaatataaacgaatatataaaaaaatattataaagaaaat
ataaatttgaatagtatatcagatgttttttttataagtccaaattatttgagttctatt
tttaatgaaagaaataaagtttcaataactgagtatataaatcttcttaggatagaagaa
tctaaaaaatatctgttagatagaagcatgagtattagtgatatttgtaagaaagtaggt
tttaataacagtagttatttttcacaaatatttaagaagtttaatagtataactccaaat
gaatatagaaagaatatgctggataataagtattaa
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