Clostridioides difficile 630: CDIF630_02275
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Entry
CDIF630_02275 CDS
T03885
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pdc
Clostridioides difficile 630
Pathway
pdc00300
Lysine biosynthesis
pdc00470
D-Amino acid metabolism
pdc01100
Metabolic pathways
pdc01110
Biosynthesis of secondary metabolites
pdc01120
Microbial metabolism in diverse environments
pdc01230
Biosynthesis of amino acids
Module
pdc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pdc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CDIF630_02275 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CDIF630_02275 (lysA)
Enzymes [BR:
pdc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
CDIF630_02275 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
DUF2101
Ribosomal_L12_N
Motif
Other DBs
NCBI-ProteinID:
AJP11788
UniProt:
Q188C1
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All DBs
Position
complement(2351015..2352307)
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AA seq
430 aa
AA seq
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MKLHGTMTVNNDELYIGGVSCLELSKKYQTPLYVFDEALVRQNCREYIEYFKAREGKNKV
AYAGKAFLPLYMCNLINEEQMCLDVVSGGELYTAYKSNFPMEKVFFHGNNKTKKEINMGL
DLGVGKFVVDNFYELDLLEALCEDKGKTQEIYFRITPGIEAHTHDYIKTGQIDSKFGFAL
VNGDLFRAIEKLSEYKNIKLVGLHAHIGSQIFDVEPYIDTVDIMMNLVKEIKEKFNIQLT
EIDLGGGVGVYYSEGDKPKTIKEFCETIITKAETSCKELGIEVPTLVIEPGRSIVANAGS
TLYTVGSIKDIKDVRVYVSVDGGMTDNVRPSLYQASYECSIVNKINHEAMNHVTIAGKCC
ESGDILIGDINIMDIKSGDILITTSTGAYGYSMSSNYNKIPRAAVVSVFDGNDKIICKRQ
SYEDLLALEI
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttcatggaactatgactgtaaataatgatgaattatatattggaggagtgagt
tgtttagaacttagtaaaaaatatcaaactccactttatgtatttgatgaagctttagtt
agacaaaattgtagagaatatatagaatattttaaggctagagagggaaaaaataaagtt
gcttatgcagggaaagcttttttacctctttacatgtgtaatcttataaatgaagaacaa
atgtgtttagatgtagtttcaggaggcgagttatatacagcttataaatcaaattttcct
atggaaaaagttttctttcatggaaacaataagactaaaaaagaaataaacatgggatta
gatttaggtgtaggtaaatttgtagtggataatttttatgaattagatttgcttgaagca
ttatgtgaagataaaggtaaaactcaagagatatactttagaataactcctggtatagaa
gctcatacacatgattatataaaaactggacagatagattctaaatttggatttgcttta
gtaaatggagatttatttagagcaatagaaaaattaagtgaatataaaaatattaaactt
gtaggtcttcacgctcatataggttcacaaatatttgatgtagaaccatacatagataca
gtggatataatgatgaacttggtaaaagaaataaaagaaaaattcaacatacaactaaca
gaaattgacctaggtggaggagttggcgtttattatagcgaaggagataaacctaaaact
ataaaagagttttgtgaaaccataatcactaaagcagaaacttcgtgtaaagagcttgga
atagaagtacctacattggtaatagaaccaggaaggtcaatagttgcaaatgcaggaagt
acattgtatacagtaggttctataaaagatataaaagatgttagggtttatgtaagtgta
gatggaggtatgacagataatgtaagaccttcgttgtaccaagctagttatgagtgtagt
attgtgaataaaattaatcatgaggctatgaatcatgtaacaatagctggaaaatgttgt
gagagtggagatatattaattggagatataaacataatggatattaaaagtggagatata
cttataacaacatcaactggtgcatatggatattcaatgtcttcaaattataataaaata
ccaagagcagcagtagtatcagtatttgatggaaatgataagataatttgtaagagacaa
agctatgaggacttattagctttagagatataa
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