Clostridioides difficile 630: CDIF630_02926
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Entry
CDIF630_02926 CDS
T03885
Symbol
appA
Name
(GenBank) ABC-type transport system, oligopeptide-family solute-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
pdc
Clostridioides difficile 630
Pathway
pdc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pdc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CDIF630_02926 (appA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdc02000
]
CDIF630_02926 (appA)
Transporters [BR:
pdc02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
CDIF630_02926 (appA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AJP12416
UniProt:
Q183A6
LinkDB
All DBs
Position
3071777..3073336
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AA seq
519 aa
AA seq
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MKFKKLASLILVSSLMLTFTACASNDKDKSNGSKSGGTVVIPMASDPDIINGAFANVKED
SLASNIVYAPLYTYEKGNLVNYLAEKVDFKDSKELTIKLKSNLKWHDGKPITAEDVLFTF
NTVLDEKQNSPSRQYLLVGEKPVKVEKIDDLTVKITLPTASESFLYGISKISPIPKHVFE
GESNIAKSEKNNNPVGSGAFKFKEWKKGESIVFEKNADYFGGEPKADSIALKIIPNEASQ
EAALNNGEISLMKTSAEGYEKAKSNSNLQTYTYSEERLNYIVFNQNISNMANKEVRQALS
YALNRNEMIESAYGKEGSVPAKSILVPEADFYTEEGVEGYDQDTNKAKDLLDKSGVKIDK
LKIGYNTGRFGHKNYALVAQQELKKIGIEAEIVPYESKAFFNILFSNSTECDMYVNGYAW
GLEPNPYRGMFETGQYCNQTKYSNAEIDALWEKGFTELNKEKREEIYKQIQQDISKDAPI
YTIDYEQNLMAAQKNLKGIKDAKPSPAILFEDWSKLYVE
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttaaaaaattggcatcattaatcttagtttcatcattaatgcttacatttaca
gcctgtgcttccaatgataaagacaagtctaatggaagcaaatctggtggaactgttgta
atacctatggcaagtgacccagatataatcaatggagcttttgcaaacgttaaagaagac
tctcttgcatcaaatatagtttatgctcctctttatacttatgaaaaaggaaatttagta
aattatttagcagaaaaagtagattttaaagatagtaaggaattaactataaaattaaaa
tccaatttaaaatggcatgatggaaagccaataactgctgaagatgtcttatttacattt
aatacagttttagacgaaaaacaaaattcaccatcaagacaatacttattggtgggtgag
aaaccagttaaagtagaaaaaattgatgatttaacagttaagattactttaccaactgca
agtgaatctttcttatatggtatatctaaaatttctccaataccaaaacatgtgtttgaa
ggagaatcaaatatagctaagtcagaaaaaaataataatccagttggttctggtgcattc
aagtttaaggaatggaaaaaaggtgaaagcatagtatttgaaaagaatgcagattatttt
ggtggagaacctaaggcagattctatagcgctaaaaataattcctaatgaagcatctcaa
gaagcagctttaaataatggcgaaatttcacttatgaagacatctgctgaaggatatgaa
aaggcaaaatcaaactcaaacttacaaacttatacttatagtgaagaaagattaaactac
attgtatttaaccaaaatatatcaaacatggctaacaaagaagtaagacaagccttatca
tatgccttaaatagaaatgaaatgatagaatcagcatatggaaaagaaggttctgtacct
gctaaatctatattagttccagaagcagacttctatacagaagaaggtgttgaaggatat
gaccaagatacaaataaggctaaagacttattggataaaagtggtgttaaaattgataaa
ttaaaaataggttataacacaggtagatttgggcataaaaactatgccttagtagctcaa
caagagttgaaaaaaattggtatagaagctgaaatagttccttatgaaagtaaggcattc
ttcaatatactatttagtaatagcactgaatgtgatatgtatgtaaatggttatgcttgg
ggattagaaccaaacccatatagaggtatgtttgaaactggtcaatattgcaaccaaact
aaatattctaatgctgaaatagatgctttatgggaaaaaggatttactgagttaaacaag
gaaaaacgtgaagaaatatataagcaaatacaacaggatatatctaaggatgcgcctatt
tacactatagattatgaacaaaatttaatggcagctcaaaaaaatctaaaaggaataaaa
gatgctaagccatctcctgcaatattatttgaagattggtctaaactgtatgtagaataa
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