Clostridioides difficile 630: CDIF630_03032
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Entry
CDIF630_03032 CDS
T03885
Symbol
capD
Name
(GenBank) putative capsular polysaccharide biosynthesis protein
Organism
pdc
Clostridioides difficile 630
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
GDP_Man_Dehyd
CoA_binding_3
RmlD_sub_bind
3Beta_HSD
Sacchrp_dh_NADP
NAD_binding_4
TrkA_N
PglD_N
Shikimate_DH
adh_short
Pyr_redox_2
GFO_IDH_MocA
KR
CoV_M
GARS_N
DUF4470
Motif
Other DBs
NCBI-ProteinID:
AJP12516
UniProt:
Q183K5
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Position
complement(3203502..3205415)
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AA seq
637 aa
AA seq
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MRESIDLEKESFFNRLFKKYKFRHLTLLILDICSVLVAFRMSLSLTGNLNAFTTNDIIIS
VCIYIVLHIVSFRLFKCYNTLWRYAGEEEIISIFVATLAYLIPIYIINKLLGFDYPIMFY
VLNTIFIIMFTSGARIAYRAIRIVMNKTYSRGKVSNILIIGAGDAGEMVIQELKRNPELK
KVAVAIIDDDKNKIGRIIHNVKIVGTTSDIKDVVEKYNVDEIIFSIANIEKRRKKDIIDI
CKNTNCKIKTIPGIYEIIDGKVDIKQIREVEIEDLLGREPIKTNLREISNYIEGKVILIT
GGGGSIGSELCRQIAGFNPKELIIVDNYENNAYSIQQELLRKYKNKLDLKTVIASIREEK
RMDEIFNKYKPEVVFHAAAHKHVPLMESSPGEAIKNNIFGTLNIAGLSSKYRAKKFVLIS
TDKAVNPTNIMGATKRAAEMIIQTMNAESQTEFVAVRFGNVLGSNGSVIPLFKKQIEDGG
PVTVTHPDIIRYFMTIPEAVGLVIQAGAMAKGGEIFVLDMGEPVRILDLAKNLIKFSGFE
PDVDIKIEFSGLRPGEKLYEELLMSEEGLLDTEHKKIFIGRPIDVDREKITKYLKLLREI
TNNEEVEKIDGIMRELVPTYIKPEDANIKEIATTREK
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgcgagaaagtatagatttagagaaagaaagcttttttaataggctttttaaaaaatat
aaatttagacatttaacactattaattctagatatttgtagcgtactagtagcgtttcga
atgtctttaagcttgacaggtaatttaaatgcatttaccactaatgatataataatttca
gtatgtatatatatagtacttcatatagtatcatttagattgtttaagtgctacaacaca
ttatggagatatgcaggagaagaagaaattatatctatttttgtggcaactttagcttat
ttaattccgatttatataataaataaattattagggtttgattatcctataatgttttat
gtattaaatacaatatttattataatgtttacaagtggcgcaagaatagcctatagagct
ataagaatagtcatgaacaagacatattctagaggaaaggtttcaaatatccttataatt
ggtgcaggagatgcaggagaaatggttatacaggaactaaaaagaaatccagaacttaaa
aaagtagcagtggctataattgatgatgataaaaataaaattggaagaataatccataat
gtgaaaattgtaggaacaacttcagatataaaagatgtggtagaaaagtacaatgtagat
gagataatcttttcaatagcaaacatagagaagcgtagaaaaaaagatattattgatata
tgtaaaaacactaactgtaaaataaagacaataccaggaatttacgaaattatagatgga
aaagttgatataaaacagattagagaagtagagatagaagacttgttgggtagagagcct
ataaaaacaaatttaagagagataagtaattacattgagggaaaagtaatcttaataact
ggaggaggaggctcaattggttcagagctttgcagacagattgcaggatttaatcctaaa
gagcttattatagttgataattatgaaaataatgcttactcaatacaacaagaattactt
agaaaatataaaaataaattagatttgaagacagtaatagcatcaataagagaagaaaaa
agaatggatgaaatatttaataaatataaaccagaagtggtatttcatgcagcagcacat
aaacatgttcctcttatggaatcgagccctggcgaagctataaagaataatatatttgga
actttaaacatagctggcttgtcttcaaaatatagagctaagaaatttgtccttatatct
acagataaggctgtaaaccctactaacataatgggagctactaaaagagctgctgaaatg
attatacagactatgaatgctgaaagccagactgaatttgttgctgttagatttggaaat
gtgcttggtagtaatggtagtgtaattccactttttaagaagcaaattgaagatggcgga
ccagtgacagttactcatccagatattattagatattttatgacaataccagaagcagta
ggcttagttatacaagctggggctatggctaaaggtggagaaatatttgtacttgatatg
ggagaacctgtaagaatattggatttagcaaaaaacttaattaaattcagtggatttgag
ccagatgttgatataaaaattgaattttctggtcttagaccaggagaaaagttgtatgaa
gaactacttatgtcagaagaaggtctgttggatacagagcataaaaagatttttattggt
agaccaatagatgttgatagagaaaaaataacaaaatacttaaaacttttaagagaaatt
actaacaatgaagaggttgaaaaaatagatggtattatgagggaattagtgccaacttat
attaaaccagaagatgctaatatcaaagaaattgcaacaactagagaaaagtag
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