Clostridioides difficile 630: CDIF630_03107
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Entry
CDIF630_03107 CDS
T03885
Symbol
serS2
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
pdc
Clostridioides difficile 630
Pathway
pdc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pdc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CDIF630_03107 (serS2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pdc01007
]
CDIF630_03107 (serS2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdc03016
]
CDIF630_03107 (serS2)
Enzymes [BR:
pdc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
CDIF630_03107 (serS2)
Amino acid related enzymes [BR:
pdc01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
CDIF630_03107 (serS2)
Transfer RNA biogenesis [BR:
pdc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CDIF630_03107 (serS2)
Prokaryotic type
CDIF630_03107 (serS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
GAS
DUF2981
DUF4894
Nup88
COG3_N
Motif
Other DBs
NCBI-ProteinID:
AJP12588
UniProt:
Q183S4
LinkDB
All DBs
Position
complement(3304718..3305989)
Genome browser
AA seq
423 aa
AA seq
DB search
MLDIKRIRENLDCIKKAMERRGEKDFNLDEVVKLDDERRKILQEVEVMKNELNTASKNIP
NLIKEGKDVENEKIKLKELSDKIKVIDQNLKEVEDKMEYLLMRIPNVPHPEVPQGETDED
NVEVRTWGKTTTFDFESKAHWEIGTELGILDFETASKITGSRFTLYKGLGARLERALLNF
YLDTNTKVNGYTEVIPPFMANRNSFLGTGQLPKFEEDMFKIEGLDYFMIPTSEVPLTNIH
ANEILKFEQLPINYTAYTPCFRSEAGSAGRDTRGLVRQHQFNKVEMVKIVAPEESYNELE
KLTNNAETMLQLLNLPYRVVKICTGDLGFTASFKYDVEVWMPSYNRYVEISSCSNCEDFQ
ARRAGIRFKRDKDSKTEYVHTLNGSGLAIGRSVAVILENYQQEDGSVVVPEVLRAYMGVS
VIK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgcttgatataaaaagaataagagaaaatttagattgtataaaaaaagcaatggaaaga
aggggcgaaaaagactttaaccttgatgaagtagttaagttagatgatgaaagaagaaag
attcttcaagaagttgaagttatgaaaaatgaattaaatacagcatctaaaaatatacca
aatcttataaaagaaggtaaagatgtagaaaatgaaaagattaaactaaaagagttatct
gataaaattaaggtaatagaccaaaatcttaaagaagtagaagataagatggaataccta
ttaatgagaataccaaatgtaccacatccagaagtaccacaaggtgaaactgatgaagat
aatgttgaagtaagaacttggggaaagactactacctttgattttgaatctaaggctcat
tgggaaattggaacagaattaggtatacttgattttgaaacagctagtaaaataactggt
tcaagatttactctttacaaaggattaggtgctagattagagagagcattattaaatttt
tacttagacacgaatacaaaagtaaatggatatacagaagttattccaccatttatggca
aatagaaatagttttttaggtacaggacagttacctaagtttgaagaagatatgtttaaa
atagaaggtctggactattttatgattccaacatcagaagttcctttaactaatatacat
gctaatgaaatacttaaatttgaacaattaccaataaattatacagcttatactccatgt
tttaggtcagaagctggttctgctggaagagatacaagaggtttagtaagacagcatcag
tttaacaaagtagaaatggttaaaatagttgcaccagaagaatcttacaatgagttagaa
aagcttactaacaatgcggaaactatgctacaattattgaatctgccttatagagtagta
aagatatgtacaggtgatttaggatttacggcttcttttaaatatgatgtagaagtttgg
atgccaagttacaataggtatgttgagatttcatcttgttcaaactgcgaagatttccaa
gctagaagagcaggaataagatttaaaagagataaagattctaaaactgaatatgtacac
acattaaatggctctgggttagctattggaagaagtgttgcagttatattagaaaattat
caacaagaagatggttctgtggttgttcctgaagttttaagagcatatatgggagtttct
gttattaaataa
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