Clostridioides difficile 630: CDIF630_03717
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Entry
CDIF630_03717 CDS
T03885
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
pdc
Clostridioides difficile 630
Pathway
pdc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CDIF630_03717 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdc03400
]
CDIF630_03717 (uvrB)
DNA repair and recombination proteins [BR:
pdc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CDIF630_03717 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CDIF630_03717 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
DEAD
UVR
SWI2_SNF2
AAA_30
AAA_22
Microtub_bd
Kinesin
UvrD-helicase
DUF87
DUF3071
AAA_19
T2SSE
AAA_7
PIF1
HEM4
Motif
Other DBs
NCBI-ProteinID:
AJP13186
UniProt:
Q180R0
LinkDB
All DBs
Position
complement(3980719..3982689)
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AA seq
656 aa
AA seq
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MDFKIKSDFKPTGDQPEAIKSIVDSINRNEKFSTLLGVTGSGKTFTMANIIQQVKKPTLI
MAHNKTLAAQLYSEFKEFFPDNAVEYFVSYYDYYQPEAYVAHSDTYIEKDASINDEIDKL
RHSATASILERRDTIIISSVSCIYGLGDPKDYKELMLSIRPGMQRDRDDVIKRLIEIQYE
RNDINFTRGTFRVRGDILEIFPASNDEKAIRIEFFGDEVDRITEIDYVTGKIVGTRNHVV
IFPASHYVTTPERIEKAIVEIENELQEQIKFFKENDRLLEAQRIEQRTKYDIEMLKEIGF
CQGIENYSRHITGRSEGERPYTLMDFFPDDYLIIVDEAHVTIPQVRGMYAGDRSRKTSLI
ENGFRLPSALDNRPLNFQEFEGNINQMLFVSATPGPYEIQHSETIAEQIIRPTGLLDPIV
EVRPINNQIDDLVGEITKTIEKNERVLITTLTKKMSEDLTNYLKEIGIKVKYLHSDIVTL
ERTEIIRDLRLGKFDVLVGINLLREGLDIPEVSLIAILDADKEGFLRSETALIQTIGRAA
RNENGRVIMYADRITDSMQNAIDETKRRRDIQNLYNEEHNIIPKTIQKNIRDSIEATKVA
EEEVVYGISDTDDKDEIRANIDKLKSEMMEAAQNLQFERAAELRDKVKQLEEKLEK
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggattttaaaataaaatcagacttcaaacctacaggtgaccaaccagaagctattaaa
tcaatagtggattctataaatagaaatgagaaattttcgacattattaggtgtaacgggt
tcaggaaaaacattcacaatggcaaatatcattcaacaagttaagaaacctaccctaata
atggctcataataaaactctagcagcacaactttacagtgagtttaaagaatttttccca
gacaatgcagttgaatactttgtaagttactatgattattatcaaccagaagcatatgta
gctcacagtgacacttatatagaaaaagatgcaagcataaatgatgaaatagataaactt
cgacattctgctacagcatctattttagagagaagagatactataataatatcatctgta
tcttgtatatatggacttggtgacccaaaagactataaagaacttatgttatctataaga
ccaggtatgcaaagagacagagatgatgtaataaaaaggttaatagagatacaatacgaa
agaaatgacataaactttacacgaggtacctttagagttagaggagatatactagaaata
ttcccagctagtaatgatgaaaaagcaataagaatagaattttttggtgatgaggtagat
agaataacagaaattgattatgtaacagggaagattgttggtactagaaatcatgttgtt
atattcccagcatctcactatgtaacaacgccagaaagaattgaaaaggcaattgtagaa
atagaaaacgagcttcaagaacaaattaaatttttcaaggaaaatgataggctattagaa
gcacaaagaattgaacaaagaactaagtatgatatagaaatgttaaaggaaataggattt
tgtcaggggatagagaactattctagacatattacaggaaggtcagaaggagaaagacca
tatactttaatggatttcttcccagatgattatttgataattgtagatgaggcacatgtc
actataccacaagtaagaggtatgtatgcaggagacaggtctagaaaaacatcacttata
gagaatggttttagattaccttctgcacttgacaatagaccattaaattttcaagaattt
gaaggaaatataaatcaaatgttgtttgtaagtgctacaccagggccttatgaaattcaa
cactcagagacaatagcagaacagataataagaccaactggccttttagacccaattgta
gaagtaagacctataaataatcaaatagatgatttggtaggagaaataactaaaactata
gaaaaaaatgaaagagtgcttataaccactttaactaaaaaaatgagtgaggacttgact
aactatcttaaagaaatagggataaaagttaaatatttacactcagatatagttacatta
gaaagaacagaaataataagagatttaagattagggaagtttgatgtccttgtaggaata
aacttacttagagaaggattggatataccagaagtttcacttatagcaattttagatgca
gacaaagaaggtttcttacgttccgaaacagctttaatacagactattggacgtgcagct
agaaatgaaaatggaagagtaattatgtatgcagacaggataactgactcaatgcaaaat
gctattgatgaaacaaagagaagaagagatatacaaaatttatataatgaagagcacaat
atcattcctaaaactatacagaaaaatataagagatagtatagaagctactaaggttgca
gaggaagaagttgtatatggaatatctgatacagatgataaagacgaaataagagctaat
atagataaattaaaatcagagatgatggaagctgctcaaaacttacaatttgaaagagca
gcagaacttagagataaagtgaaacaattagaagaaaaattggaaaaatag
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