Clostridioides difficile 630: CDIF630_03838
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Entry
CDIF630_03838 CDS
T03885
Symbol
rnmV
Name
(GenBank) ribonuclease M5
KO
K05985
ribonuclease M5 [EC:
3.1.26.8
]
Organism
pdc
Clostridioides difficile 630
Brite
KEGG Orthology (KO) [BR:
pdc00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
CDIF630_03838 (rnmV)
Enzymes [BR:
pdc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.8 ribonuclease M5
CDIF630_03838 (rnmV)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4093
Toprim
Toprim_4
Toprim_2
Toprim_3
DarP
Motif
Other DBs
NCBI-ProteinID:
AJP13302
UniProt:
Q181C4
LinkDB
All DBs
Position
complement(4102420..4102950)
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AA seq
176 aa
AA seq
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MIKEIIVVEGRDDVTAVKRAIDAELITTGGFGFPKGVMERIKAANERRGVIIFTDPDFAG
EKIRKKIASEVPGCKHAFLPREEAKKDGDIGIENATPQSIIAALNKVRTENTEKRDEFKQ
VDLIRNGLIGNEEASLRRDALGKILGIGYGNAKQFLNRLNNYGVEREEFIDALKQI
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgataaaagaaataatagtagtagagggtagagatgacgttacagcagttaagagagca
atagatgcagaacttataactacaggtggatttggatttccaaaaggtgtaatggagcgt
ataaaagctgctaatgaaagacgtggtgttataatatttacagacccagattttgcaggt
gaaaaaataagaaaaaaaatagcatcagaagttccaggatgtaaacatgcatttctaccg
agagaggaagctaaaaaggatggagatataggtattgagaatgctactcctcaaagtata
atagcagctctgaataaagttagaactgaaaatacagaaaaaagagatgaatttaagcaa
gttgacttaattagaaatggtcttataggtaatgaagaagcatcacttagaagagatgca
cttggaaaaatacttggaattggatatggaaatgcaaaacaatttttaaatagattgaat
aattatggagttgaaagagaagaatttatagatgcattaaaacaaatctaa
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