Clostridioides difficile 630: CDIF630_03910
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Entry
CDIF630_03910 CDS
T03885
Symbol
carB1
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
pdc
Clostridioides difficile 630
Pathway
pdc00220
Arginine biosynthesis
pdc00240
Pyrimidine metabolism
pdc00250
Alanine, aspartate and glutamate metabolism
pdc01100
Metabolic pathways
pdc01110
Biosynthesis of secondary metabolites
pdc01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pdc00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
CDIF630_03910 (carB1)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
CDIF630_03910 (carB1)
00220 Arginine biosynthesis
CDIF630_03910 (carB1)
Enzymes [BR:
pdc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
CDIF630_03910 (carB1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_3
ATP-grasp
GARS_A
ATP-grasp_4
RimK
Motif
Other DBs
NCBI-ProteinID:
AJP13370
UniProt:
Q181J0
LinkDB
All DBs
Position
complement(4173538..4176744)
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AA seq
1068 aa
AA seq
DB search
MPKLDSIKKTLVLGSGPIIIGQAAEFDYSGTQACQALKEEGIEVVLVNSNPATIMTDKEI
ADKIYIEPLTIEFIEKIIEKERPDSLLAGMGGQTGLNLAVELHDAGILDKYNVKVIGTSI
ESIKKGEDRDLFREVMKEINQPVIVSDIVTNLEAGLEFANKIGYPVVVRPAYTLGGTGGG
IADTEEELREILSHGLQLSPVGQVLLEKSIKGWKEIEYEVMRDGNGNCITVCNMENVDPV
GVHTGDSIVVAPSQTLSDEEYQLLRKASIDIINAIEVQGGCNVQIALNPHSLEYAIIEIN
PRVSRSSALASKATGYPIAKVAAKIALGYTLDEIENAVTKKTYACFEPTLDYVVVKIPKW
PFDKFRHANRKLGTKMMATGEIMSIGSNFEAAILKGIRSLETGKYSLVHAPSEGRTLEEL
KARVVVPDDERLFDLAEMIRRGYKVEMISEITGVDKWFINKFKWIVEQEEKLKVLKIEDL
DKEYLHELKKKGFSDKGISDLMKISPEKLYELRSLYNIQPVYKMVDTCGGEFEALSPYYY
STYEQYDEVVVSDKRKVVVLGSGPIRIGQGIEFDYCSVHCVKSLRKMGIETIIVNNNPET
VSTDFDTSDKLYFEPLTEEEVLNIIEKEKPEGVILQFGGQTAIKLAKFLHEKNIPILGTD
FRDIDAAEDREKFDDLLERLDINRPKGKGVWTTNEGVEIAKELGYPVLVRPSYVLGGQGM
EITYNEEKLIQYLDDAFDRDHKNPVLIDKYLTGREIEVDAICDKEDILIPGIMEHLERAG
VHSGDSTTMYPSQNISDEIKEKIVEYTKKIALDLNVLGMVNIQFIEFQNELYIIEVNPRA
SRTVPYISKVSGVPIVDLATKCMLGAKLKDLGYGTGVYKEPKLVSVKVPVFSMSKLSKVE
VSLGPEMKSTGEVLGVGENLEEALYKGFLAAGRHMSDERGVVLATVNNHDKDEFIEIAKD
MKELGYTFVATEGTAKSLRENGIEADIVNRIEEPRPNILDAIRNKQVDIVINTPTKGNDS
TRDGFKMRRTAIEFSTEIMTSLDTLKALVEVKKKHLNKDKLKVYNIAE
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaattagatagtataaagaaaactttagtattagggtcagggccaataataata
ggtcaagctgcagagtttgactattcaggaacacaggcctgccaagcattaaaagaagag
ggaattgaagttgtattagtaaatagtaacccagctactataatgactgataaagaaatt
gcagataaaatatatatagaaccattaacaatagaatttatagaaaaaataatagaaaaa
gaaagaccagacagtttacttgcaggtatgggtggtcagacaggattaaacttagctgta
gaattacatgatgctggtatattagataaatataatgtaaaagttataggaacatctata
gaatctataaaaaagggcgaagatagagatttatttagagaagtaatgaaagaaataaat
caaccagtaatagttagtgatatagttacaaatttagaagcaggtcttgagtttgccaat
aagataggatatccagtagttgtaagaccagcatatacgctaggtggaactggtggaggt
atagctgatactgaggaagaattaagagaaatactttcacatggactacagctaagtcct
gttggacaagttcttcttgaaaagagtataaaaggttggaaagaaatagaatatgaagta
atgagagatggaaatggaaactgtataactgtatgtaatatggaaaatgtagacccagtt
ggagttcatacaggagacagtatagttgttgctccaagtcaaactctaagtgatgaagag
tatcaactacttagaaaggcatcaatagacataataaatgcaatagaggttcaaggtgga
tgtaacgttcaaatagctttaaacccacatagtttagaatatgcaataatagaaataaac
ccaagagttagtaggtcatcagccttagcatcaaaagctacaggatacccaatagcaaaa
gtagcagctaagatagctttaggttatactttggatgagatagaaaatgcagtaactaaa
aaaacttatgcttgttttgagccaacattagattatgtggtagtaaaaataccaaagtgg
ccatttgataaatttagacatgccaatagaaaattaggaactaagatgatggcaactggt
gaaatcatgagtataggaagtaactttgaggctgctattcttaaaggtataagatcactt
gaaacaggaaaatattcattggttcatgctccatcagaaggtagaacattagaagaatta
aaggctagagtagtagtacctgatgatgagagactatttgacttagctgaaatgataaga
agaggttataaagtagaaatgatatcagaaataactggtgttgataagtggtttataaat
aaatttaaatggatagtagaacaagaagaaaagttaaaagttctaaaaatagaagactta
gataaagaatatttacatgaattaaagaaaaagggattttctgataaaggtatatctgac
ttaatgaagataagcccagaaaaattatatgaattgagaagtttatataatatacaacca
gtttataaaatggttgatacatgtggaggagaatttgaagctctatcaccttattactat
tcaacttatgaacaatatgatgaggtagtagttagtgataagagaaaagttgtagtattg
ggttctggtccaataagaataggtcaaggaatagaatttgactattgttcagttcactgt
gtaaaatctttaagaaaaatgggaatagaaactataattgtaaacaataaccctgaaact
gtaagtacggattttgatacatctgataagttgtattttgaaccattaacagaagaagaa
gttttaaatataatagaaaaagaaaaaccagaaggtgtaatactacagtttggtggacaa
acagctataaaattggctaagtttttacatgaaaaaaatatacctatactgggaacagac
tttagagatatagatgcagcagaagatagagaaaaatttgatgatttactagagagacta
gatataaatagaccaaaaggaaaaggtgtatggacaactaatgaaggtgttgaaattgct
aaggagttaggttatccagtattagttagaccatcttatgtacttggtggtcaaggtatg
gaaataacttataacgaagaaaaactaattcagtatttggatgatgcatttgatagagac
cataaaaatccagtacttatagataaatatctaactggtagagaaatagaagtagatgct
atatgtgataaagaagatatattgatacctggtataatggagcatttagaaagagctgga
gttcactctggagatagtacaacaatgtatccaagtcaaaatatatctgatgaaataaaa
gaaaaaatagtagaatacactaaaaaaatagctttagaccttaatgtgcttggtatggtt
aatatacaatttatagaatttcaaaatgaattatatataattgaggttaaccctagagct
agtagaacagttccatatataagtaaagtaagtggagtaccaatagttgacttggctact
aagtgtatgttaggagctaaattaaaggatttaggatatggtacaggagtttacaaagag
ccaaaattagtatcagtaaaagtaccagtattctcaatgtctaaattatctaaagttgaa
gtaagtctaggacctgaaatgaagtctacaggagaagtcctaggtgtaggagaaaattta
gaagaagccttatataaagggttcttggcagcaggtagacatatgtctgatgaaagagga
gtagtacttgctactgtaaataatcatgataaagatgagtttatagagatagcaaaagat
atgaaagaattaggatatacttttgttgctacagaaggaacagcgaagagtttaagagaa
aatggaatagaggctgatatagtaaatagaattgaagaacctagaccaaacatattagat
gctataagaaataaacaagttgatatagtaataaatacaccaactaaaggaaatgactct
acaagagatggatttaagatgagaagaacagccattgaattttctactgaaataatgaca
tctttggatacactaaaagctttagtagaagttaagaagaaacatttaaacaaagataaa
ttaaaagtttataatatagctgagtaa
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