Pseudoxanthomonas daejeonensis: MNQ95_00645
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Entry
MNQ95_00645 CDS
T08066
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
pdd
Pseudoxanthomonas daejeonensis
Pathway
pdd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pdd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MNQ95_00645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdd03000
]
MNQ95_00645
03400 DNA repair and recombination proteins [BR:
pdd03400
]
MNQ95_00645
Enzymes [BR:
pdd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
MNQ95_00645
Transcription factors [BR:
pdd03000
]
Prokaryotic type
Helix-turn-helix
AraC family
MNQ95_00645
DNA repair and recombination proteins [BR:
pdd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MNQ95_00645
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
UNK57668
LinkDB
All DBs
Position
133600..135129
Genome browser
AA seq
509 aa
AA seq
DB search
MSSAPSPAALPDPRVCERARLSRDARFDGLFFTAVRSTGIYCRPVCPAPAPRPENVDYYR
SAAAAESAGFRPCLRCRPELAPGDGAWRRGDETVARALKLIDQGFLAESTLADLAARVHL
GERQLRRLFVERLGAAPIGVHGTRRLLFAKQLLTETTLPVTEVALAAGFSSLRRFNATFL
EAYRMAPRELRRRTPAEPAVRDASQPLVLKLGYRPPYEFGAMLDFLRGRALPGVETVDTR
SYARVVGTEQSPGWLRVSAWPGSRGGRIHALKLELHGAAPTQLAGIVARVRRMFDLDADP
QAIAAALSADPHLRPLLKKHPGLRLPSGWDGFEIAVRAIIGQQVSVAAARTLTTRVAQRH
GRPVAIAGPDGLDRLFPEPVALATGNLEGLGLTGARAATVRAVAVALLEGRVDFRAEQTL
EEFTDSWSALPGIGPWTAHYLALRALGHPDAFPAEDLVLQRALTGDGSRLSARQLRQHAE
AWRPWRGYAVIHLWRDAMAAAPAPVEKKR
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgcgccctcccccgccgccctgcccgatccgcgcgtgtgcgaacgcgcccgg
cttagccgcgacgcacgcttcgacggactgttcttcaccgccgtgcgcagcaccgggatc
tactgccgcccggtatgtcccgccccggcgcccaggcccgagaatgtcgattactaccgc
agcgccgcggcggccgaatcggcgggcttccggccctgcctgcgctgccgccccgagctg
gcgccgggggacggcgcctggcgccgtggcgacgagacggtggctcgcgcactcaaactg
atcgaccagggattcctggccgaatccacgctggccgacctggccgcccgggtacacctt
ggcgagcgccagttgcgccgcctgttcgtcgagcgcctcggcgcggcgccgatcggggtg
cacggaacccggcgcctgctgttcgccaagcaactgctcaccgaaaccacgctgccggtc
accgaggtggcgctggccgcgggcttctccagcctgcgccgtttcaatgcgacgttcctc
gaggcctatcgcatggcaccgcgggaactgcgccggcgcacccccgccgaaccggccgtg
cgcgatgcgtcgcagccgctggtgttgaagctcggctatcgcccgccctacgagttcggc
gcgatgctcgacttcctgcgcggccgcgcactgcccggcgtggaaacggtcgatacgcgc
agctatgcgcgggtggtcggcacggagcagtcgccgggctggctgcgggtcagcgcctgg
ccgggcagccgcggtggtcgcatccatgctctgaagctggaactgcacggtgccgcgccc
acgcaactggccggcatcgtcgcccgggttcgacgcatgttcgacctcgatgccgatccg
caggcgatcgcggccgcactgtcggccgatccgcacctgcgcccgctgttgaagaagcat
cccggcctgcgcctgcccagcgggtgggacggcttcgagatcgcggtgcgcgccatcatc
ggccagcaggtcagcgtcgccgccgcgcgcacgctgaccacgcgggtggcccagcgccat
ggccggccggtcgccatcgccggaccggacgggctcgaccggctgttcccggaaccggtc
gcgctggcgacgggtaacctcgaaggcctgggcctgaccggcgcgcgtgcagccacggtg
cgcgcagtcgccgtcgccctgctcgaaggacgcgtcgatttccgcgccgagcagaccctt
gaagaattcaccgactcctggagcgcgctgcccggcatcggaccgtggaccgcacattac
ctggcgctgcgcgcgctcggccatcccgacgcgttccccgccgaggacctggtcctgcaa
agggcattgaccggcgatggcagccgtctcagcgcacgacagctgcgccagcacgccgag
gcctggcggccctggcgcggctacgccgtgatccatctctggcgcgatgcgatggcagca
gcgcccgcccccgtggagaagaaacgatga
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