KEGG   Pseudoxanthomonas daejeonensis: MNQ95_00860
Entry
MNQ95_00860       CDS       T08066                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
pdd  Pseudoxanthomonas daejeonensis
Pathway
pdd03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pdd00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    MNQ95_00860 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pdd03019]
    MNQ95_00860 (rnc)
   03009 Ribosome biogenesis [BR:pdd03009]
    MNQ95_00860 (rnc)
   03036 Chromosome and associated proteins [BR:pdd03036]
    MNQ95_00860 (rnc)
Enzymes [BR:pdd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     MNQ95_00860 (rnc)
Messenger RNA biogenesis [BR:pdd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     MNQ95_00860 (rnc)
Ribosome biogenesis [BR:pdd03009]
 Eukaryotic type
  90S particles
   RNase
    MNQ95_00860 (rnc)
 Prokaryotic type
  rRNA processing factors
   MNQ95_00860 (rnc)
Chromosome and associated proteins [BR:pdd03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     MNQ95_00860 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DND1_DSRM
Other DBs
NCBI-ProteinID: UNK57709
LinkDB
Position
complement(180493..181188)
AA seq 231 aa
MVVGTDRTVIRDRIGHVFADPSLLEQALTHRSAGTPHNERLEFLGDGVVNLFAAEALYLR
WPTADEGVLTRARAELVREASLATIARQLELGERLTLGPGELKSGGFRRDSILADALEAV
VAAIYLDAGYEACRRVVLPWFEQSLAALPVGRPEKDAKTRLQEWLQARQRPLPAYELVSE
SGEEHAKVFLCRCNLSEPPVSAEGEGTSRRLAEQAAAAAVLERLEPSLRHP
NT seq 696 nt   +upstreamnt  +downstreamnt
atggtggtggggactgatcgcaccgttatccgcgaccggatcggccacgttttcgccgat
ccgtcgctgctggagcaggcgctgacccaccgcagcgccggcaccccgcataacgagcgc
ctggaattcctcggcgacggggtggtcaacctgttcgcggccgaggcgctgtacctgcgc
tggccgaccgccgacgagggcgtgctgacccgggcgcgggccgaactggtccgcgaggcc
tcgctggccaccatcgcccggcaactggagctgggcgaacgcctgaccctggggccgggt
gaactgaagtccggcggcttccgccgcgattcgatcctggccgacgcgctcgaagcggtc
gtcgcggcgatctacctggatgccgggtacgaggcctgccggcgcgtggtgcttccctgg
ttcgagcagtcgctggccgccttgccggtcggaaggccggaaaaggacgccaagacccgc
ctgcaggaatggctgcaggcccggcagcgtccattgccggcatatgaactggtttccgag
agcggcgaggagcacgccaaggtcttcctctgcaggtgtaacctgagcgaacccccggtg
agtgccgagggagagggcacctcgcgccggctggccgaacaggcggcggcggcggcggtg
ctggaacggctggagccctcgctccggcatccatga

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