Pseudoxanthomonas daejeonensis: MNQ95_02020
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Entry
MNQ95_02020 CDS
T08066
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pdd
Pseudoxanthomonas daejeonensis
Pathway
pdd03030
DNA replication
pdd03430
Mismatch repair
pdd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MNQ95_02020 (dnaE)
03430 Mismatch repair
MNQ95_02020 (dnaE)
03440 Homologous recombination
MNQ95_02020 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdd03032
]
MNQ95_02020 (dnaE)
03400 DNA repair and recombination proteins [BR:
pdd03400
]
MNQ95_02020 (dnaE)
Enzymes [BR:
pdd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MNQ95_02020 (dnaE)
DNA replication proteins [BR:
pdd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MNQ95_02020 (dnaE)
DNA repair and recombination proteins [BR:
pdd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MNQ95_02020 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
UNK57911
LinkDB
All DBs
Position
436558..440127
Genome browser
AA seq
1189 aa
AA seq
DB search
MSGFVHLHVHTEFSLADSTIRVPEKPEQADPAKAKQANLLSRAVELGLPALAVTDLNNLF
ALIKFYKAAEGVGIKPIAGADLAVASGPGEAPWRLTALCRDHGGYLNLSRLLSRAWMEGH
RAEGGVVVTPEWIKDCGEGLILLAGRESLAGRLASEHRHDLAEQQLADWQRAFDGNLCLE
LVRTGRDGEEAFNAFALHASAARGIPVVASNDVRFLDKAGFDAHEARVCIASGRVLDDPK
RPRDYSPEQYLKSPEEMARVFADVPDAIANTVELARRCNLELTLGKYALPAYPVPSDETL
DSWIRKQSHDGLELRLAKNPLAEGKTRQDYVERLDFELDTIIKMGFPGYFLIVADFIQWG
KSHGIPIGPGRGSGAGSLVAWALQITDLDPIPYNLLFERFLNPERVSMPDFDIDFCMDRR
DEVIDYVARKYGRERVSQIITYGTMAAKAVVRDTGRVLGFPYGFVDSVAKLIPNILGISL
KDAMGEGKDSEMHSAELIQRYGSEDDVRDLIDLARQLEDLTRNAGKHAGGVVIAPEPLHT
FCPLFAEHDQDGLGRNPVTQFDKDDVEAIGLVKFDFLGLRTLTIIDWAVKAINVRHERAG
IPPLDIATLPLDDASVYRDVFANGNTGSVFQFESSGMRRALKDAKPDRFEDLIALNALYR
PGPMEMIPSFVARKHGLEEFAYPDPRTQPMLEETYGIMVYQEQVMQMAQIVGGYSLGGAD
LLRRAMGKKVPAEMAKHREIFREGAAKNGVGEKKADEIFDLMEKFAGYGFNKSHAAAYSL
VAYQTAWLKKHYPAEFMAATLSSDMDNTDKVVGFLNEARGLGLTVLPPQVNDSEFMFEAV
AADTVRYGLGAIKGVGRGLCEAIVAERHQGGDYADLLDFCRRVDSTKLNRRALEAMINAG
ALDALGRNRATLMLQLPEVIKATDQLAKERAAGQVSLFGASSDDAGPSLKLDLPEADEWT
LRQLLDGERDTLGHYLSGHPFDPYREEVRQLVGSDLGELDKLWAAGSGGEKRGWRPEVQV
VVAGLVAGIRRKGDSQIFVQLEDGRGRLECSVFAEGAQEFASLLVRDRVLVVQGGLREDE
FSGGYSLRLKAAWDYEQLCAQHAQRLSLRVDLVDPGLWQRIDAVLARHRPGPTPLRLHLQ
VGRGEQGATGVLDLNGPNSVRVAPPLLDALRAQPGVRAVKVAIGRPWAN
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcttcgtccacctccacgtccataccgagttttcgcttgcggactcgaccatc
cgcgtgcccgaaaaacccgagcaggccgatccggccaaggccaagcaggccaacctgctc
agccgcgcggtggaactgggcctgccggcgctggcggtcaccgacctcaacaacctgttc
gccctgatcaagttctacaaggcggccgagggcgtgggcatcaagcccatcgccggcgcc
gacctggcggtggcttcgggccccggcgaggcgccctggcgactgaccgcgctgtgccgc
gaccacggcggctacctcaatctctcgcgcctgctcagccgtgcctggatggagggccac
cgcgccgagggcggcgtggtggtgacgccggaatggatcaaggactgcggcgagggcctg
atcctgctggctgggcgcgagagcctggccggtcgcctggcctccgagcaccgccacgac
ctggccgagcagcagctggccgactggcagcgcgccttcgacggcaacctgtgcctggaa
ctggtccgcaccgggcgcgacggcgaggaggcgttcaatgcgttcgccctgcacgcttcg
gcggcgcgcggcatcccggtggtggcgtccaacgatgtgcgcttcctggacaaggccggc
ttcgacgcgcacgaggcgcgggtgtgcattgcgtcgggccgcgtgctcgacgaccccaag
cgcccgcgcgactacagccccgagcagtacctcaagtcgccggaggaaatggcccgggta
ttcgccgacgtgcccgacgcgatcgccaacacggtcgagctggcgcggcgctgcaacctc
gagctgaccctgggcaagtacgcgctgccggcctatccggtgccgtcggacgagaccctg
gacagctggatccgcaagcagtcgcacgacggcctggagctgcggctggcgaagaacccg
ctggccgagggcaagacccgacaggactacgtcgagcgcctggacttcgagctcgacacc
atcatcaagatgggcttcccgggctacttcctgatcgtggccgacttcatccagtggggc
aaaagccacggcatccccattggcccgggccgcggttcgggcgccggctcgctggtggcc
tgggctttgcagatcaccgacctggacccgatcccgtacaacctgctgttcgagcgcttc
ctcaacccggaacgcgtgtcgatgcccgacttcgacatcgacttctgcatggaccggcgc
gacgaggtgatcgactacgtcgcccgcaagtacgggcgcgagcgggtcagccagatcatc
acctacggcaccatggcggccaaggcggtggtgcgcgacaccggtcgcgtgctcggcttc
ccgtacggcttcgtcgacagcgtggccaagctgatccccaacatcctcggcatttcgctg
aaggatgcgatgggcgaaggcaaggacagcgagatgcactcggccgagctgatccagcgc
tacggcagcgaggacgacgtccgtgacctgatcgacctggcccgccagctcgaggacctg
acccgcaacgccggcaagcacgccggcggcgtggtgatcgccccggaaccactgcacacc
ttctgcccgctgttcgccgagcacgaccaggacggcctgggccgcaacccggtcacccag
ttcgacaaggacgacgtcgaggcgatcggcctggtcaagttcgacttcctcggcctgcgc
acgctgacgatcatcgactgggcggtgaaggcgatcaacgtccgccatgagcgcgcgggg
atcccgccgctggacatcgccaccctgccgctggacgacgccagcgtctatcgcgacgtc
ttcgccaacggcaacaccggctcggtgttccagttcgaatcctcgggcatgcgccgcgcg
ctgaaggacgccaagcccgaccgcttcgaggacctgatcgcgctgaacgcgctctatcgc
cccggcccgatggagatgatcccgtcgttcgtggcgcgcaagcacgggctggaggagttc
gcttatcccgaccctcgcacgcagccgatgctggaagagacctacgggatcatggtctac
caggagcaggtcatgcagatggcgcagatcgtcggcggctactcgctgggcggcgccgac
ctgctgcgccgggcgatgggcaagaaggtgccggcggaaatggccaagcaccgcgagatc
ttccgcgagggcgcggccaagaacggcgtcggcgagaagaaggccgacgagatcttcgac
ctgatggagaagttcgccggctacggcttcaacaagtcgcacgccgccgcctactcgctg
gtcgcctaccagaccgcgtggctgaagaaacactatccggccgagttcatggccgcgacg
ctgtcctcggacatggacaacaccgacaaggtggtcggcttcctcaacgaagcgcgtggc
ctgggcctgacggtgcttccgccgcaggtcaacgattcggaattcatgttcgaagcggtc
gccgccgacaccgtgcgttacggcctgggcgcgatcaagggcgtgggccgcggcctgtgc
gaggcgatcgtggccgagcgccaccagggcggcgactacgccgacctgctcgatttctgc
cggcgcgtggattcgaccaagctcaaccgtcgcgcgctggaggcgatgatcaacgccggc
gcgctggatgcgctgggccgcaaccgcgccacgctgatgctgcagcttcccgaggtgatc
aaggccaccgaccagctcgccaaggaacgcgccgccggccaggtgtccctgttcggtgct
tcctcggacgacgccggcccctcgctcaagctcgacctgcccgaagcggacgaatggacg
ctgcggcaactgctcgacggcgagcgcgacacgctcggccactacctcagcgggcatccg
ttcgatccgtaccgcgaggaagtgcggcaactggtcggcagcgacctgggcgagctggac
aagctgtgggccgccggatccggcggcgagaagcgcggctggcgaccggaagtccaggtc
gtggtcgccgggctggtcgccggcatccgccgcaagggcgacagccagatcttcgtccag
ctggaagacggtcgcggccgtctcgaatgcagtgtgttcgccgagggcgcgcaggaattc
gccagcctgctggtgcgcgatcgcgtgctggtcgtgcagggcgggttgcgcgaggacgag
ttcagcggcggctacagcctgcgcctgaaggctgcctgggattacgagcagctgtgcgcg
cagcatgcccagcggctgtcgctgcgcgtggacctggtcgatccggggctgtggcagcgc
atcgacgcggtcctggcccgccaccgccccggccccacgccgctgcgcctgcacctgcag
gtcggccgcggcgagcagggcgcgaccggcgtgctcgacctcaatggccccaactcggta
cgcgtcgcgccgcccctgctggacgcgctgcgcgcccagcccggcgtgcgcgcggtcaag
gttgccatcggccgcccctgggccaactga
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