Pseudoxanthomonas daejeonensis: MNQ95_04630
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Entry
MNQ95_04630 CDS
T08066
Name
(GenBank) 2'-5' RNA ligase family protein
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
pdd
Pseudoxanthomonas daejeonensis
Brite
KEGG Orthology (KO) [BR:
pdd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdd03016
]
MNQ95_04630
Enzymes [BR:
pdd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
MNQ95_04630
Transfer RNA biogenesis [BR:
pdd03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
MNQ95_04630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
UNK58387
LinkDB
All DBs
Position
1021004..1021570
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AA seq
188 aa
AA seq
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MARPGELFVMSRVPQALRDAGLGVLREAGLDTVLGEALYPLRNWHQSLSDLHAREARESM
RRACAAVVAEAFEMRLDRLESSVHRRIHWQFVPSAGRPEGLGRLMAAVRGQLRAQGLVEA
QGHRPHVTVSYRANRSIEPLTFAPLIWQIDTIELVEVAGHGNNYRYDVVDAWQLRPPVAP
PAQLDLLQ
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
ttggccaggcccggcgagctgttcgtcatgtcgcgcgtgccgcaggcgctgcgcgacgcg
gggttgggcgtactgcgcgaggccgggctggacacggtgctgggcgaggcgctgtatccg
ctgcgcaactggcaccagagcctgtcggacctgcatgcgcgcgaggcgcgcgaatccatg
cggcgggcctgcgccgccgtggtggccgaagccttcgagatgcggctggatcgactggag
agctcggtgcaccgacgcatccactggcagttcgtgccgtccgccgggcggcccgaaggc
ctgggcaggctgatggccgcggtgcgcggacagctgcgcgcgcagggcctggtcgaagca
cagggccatcgtccgcatgtcacggtcagctaccgggccaaccggtcgatcgaaccactt
accttcgcgccgctgatctggcagatcgacaccatcgaactcgtcgaggttgccggccat
ggcaacaactaccgctacgacgtggtcgacgcctggcagttgcgcccaccggtcgcaccg
cccgcgcagctcgacctcctccagtaa
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