Pseudoxanthomonas daejeonensis: MNQ95_07930
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Entry
MNQ95_07930 CDS
T08066
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
pdd
Pseudoxanthomonas daejeonensis
Pathway
pdd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MNQ95_07930 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdd03021
]
MNQ95_07930 (rho)
03019 Messenger RNA biogenesis [BR:
pdd03019
]
MNQ95_07930 (rho)
Transcription machinery [BR:
pdd03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MNQ95_07930 (rho)
Messenger RNA biogenesis [BR:
pdd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MNQ95_07930 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
OB_RNB
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UNK56114
LinkDB
All DBs
Position
complement(1774128..1775822)
Genome browser
AA seq
564 aa
AA seq
DB search
MSENTLPETPGSDDAPAEKRARKRVSKPADAGASEAAAAPPPAAPAPPPPQAPQASAPAP
SGGDAPSTHAPGDNAGGQHGQNNPQHGGDEAREGGRNNRRDRFRNRRDRDRNRPRDDGGM
QDDNNNNQMPHPPRPHPSVPEGFPQYSLGDLKRMPAHKLMEIAEQLQIHEGVARARKQDV
IFALLKVLTRHGEGVAADGVLEILPDGFGFLRAAEASYLAGPDDTYISPSQIRRFNLRTG
DHLSGRIRWPKDGERYFALSVVDTINGEPLEASKNKNLFENLTPLFPRKRFRLERGDGST
EDITGRILDLMAPQGKGQRALIVSQPKAGKTMMMQQIATAITTNHPDVHLIVLLIDERPE
EVTEMQRTVRGEVISSTFDEPAARHVQVAEMVIERAKRLVEHKKDVVILLDSITRLARAY
NNVVPSSGKVLTGGVDANALHRPKRFFGAARNVEEGGSLSIIATALIDTGSKMDEVIYEE
FKGTGNSEVHLSRRISEKRVFPAIDINRSGTRREDLLIEPELLQKIWILRKLLHPMDEIG
AMEFMLDKMKNTKSNDEFFSSMKR
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
ttgtccgagaacaccctgcctgaaacgcccgggagcgatgacgcacccgccgagaagcgt
gcacgcaagcgcgtgagcaagccggccgacgccggcgccagcgaggctgccgctgcaccg
ccgcccgccgctccggccccgccaccgccccaggctccccaggcctccgccccggccccg
tccggcggcgacgccccgtcaacccatgcgccaggcgacaacgccggcggccagcatggc
cagaacaacccgcagcacggcggcgatgaagcccgcgagggcggccgcaacaaccgccgc
gaccgcttccgcaaccgccgcgaccgcgatcgcaaccgcccgcgcgacgacggcggcatg
caggacgacaacaacaacaaccagatgccgcatccgccgcggccgcatccgagcgtgccg
gaaggcttcccgcagtattcgctgggcgacctgaagcggatgccggcgcacaagctgatg
gagatcgccgagcagctgcagatccacgaaggcgtggcccgtgcccgcaagcaggacgtg
atcttcgccctgctcaaggtgctgacccgccatggcgaaggcgtggccgccgacggcgtg
ctggaaatcctgcccgacggcttcggcttcctgcgcgcggccgaggccagctacctggcc
ggcccggacgacacctacatctcgcccagccagatccgccgcttcaacctgcgcacgggc
gaccacctgagtggccgcatccgctggcccaaggacggcgagcgctacttcgccctgtcg
gtggtcgacaccatcaacggcgagccgctggaagcgtccaagaacaagaacctgttcgag
aacctcacgcccctgttcccgcgcaagcgcttccgcttggaacgcggcgacggctcgacc
gaggacatcaccggccgcatcctcgacctgatggcgccgcagggcaaaggccagcgcgcg
ctgatcgtctcccagcccaaggcgggcaagacgatgatgatgcagcagatcgccacggcg
atcacgaccaaccacccggacgtgcacctgatcgtgctgctgatcgacgagcgcccggaa
gaagtgaccgaaatgcagcgcaccgtgcgcggcgaggtcatctcctccaccttcgacgag
ccggccgcgcgccacgtgcaggtcgccgagatggtgatcgagcgggccaagcgcctggtc
gagcacaagaaggacgtggtcatcctgctcgactcgatcacccgcctggcgcgcgcctac
aacaacgtcgtgcccagctccggcaaggtgctgaccggcggcgtggacgccaacgcgctg
caccgcccgaagcgtttcttcggcgcggcgcgcaacgtggaggaaggcggctcgctgtcg
atcattgccacggcgctgatcgacaccggcagcaagatggacgaggtgatctacgaggag
ttcaagggcaccggcaactccgaggtgcacctgtcgcgtcgcatctccgagaagcgcgtg
ttcccggccatcgacatcaaccgctctggcacccgccgcgaagacctgctgatcgagccg
gaactgctgcagaagatctggatcctgcgcaagctgctgcacccgatggacgagatcggc
gcgatggagttcatgctcgacaagatgaagaacaccaagtccaacgacgagttcttcagc
tcgatgaagcgctga
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integrated database retrieval system
