Pseudoxanthomonas daejeonensis: MNQ95_07975
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Entry
MNQ95_07975 CDS
T08066
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pdd
Pseudoxanthomonas daejeonensis
Brite
KEGG Orthology (KO) [BR:
pdd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdd03021
]
MNQ95_07975 (rpoH)
Transcription machinery [BR:
pdd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MNQ95_07975 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
IF2_N
KORA
HTH_10
HTH_11
HTH_3
UCR_14kD
GntR
HTH_25
Motif
Other DBs
NCBI-ProteinID:
UNK56122
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All DBs
Position
1783245..1784123
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AA seq
292 aa
AA seq
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MTQTLRSTSLVPNNLPIPSPLGSLDAYIGAVHQIPVLSVEDEQSLSRRFREGEDLDAARE
LVHSHLRFVVHVARGYSGYGLQLGDLIQEGNIGLMKAVKRFDPDMGVRLVSFAVHWIRAE
MHEFILKNWRIVKVATTKAQRKLFFNLRKAKTRLGWMNAAEVSAVARDLNVSEREVLEME
ARLSGRDVGFDAPADEDNEHAPPSPAAYLRAAEEDPSQAYERADSEDNQLQLLREGLAVL
DARSRDIIARRWLDADSKVTLQELADEYGVSAERIRQIEANAMKKMKALLAA
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgacccagaccctgcgctccaccagtctcgttcccaacaacctcccgatccccagcccg
ctggggtcgctggatgcctatatcggcgcggtgcaccagatcccggtgctgagcgtcgag
gacgagcagtccctgtcccgccgcttccgcgagggcgaagacctggacgccgcccgtgag
ctcgtgcattcgcacctgcgcttcgtggtgcacgtggcccgtggctacagcggttacggc
ctgcaactgggcgacctgatccaggaaggcaacatcggcctgatgaaggcggtcaagcgc
ttcgacccggacatgggcgtgcgcctggtgagcttcgccgtgcactggatccgtgccgag
atgcacgagttcatcctcaagaactggcgcatcgtgaaggtcgccacgaccaaggcccag
cgcaagctgttcttcaacctgcgcaaggccaagacccgcctgggctggatgaacgcggcc
gaggtcagcgccgtggcccgggacctcaatgtctccgagcgcgaagtgctggagatggaa
gcgcgcctttcgggccgcgacgtcggcttcgacgcgccggccgacgaggacaacgaacac
gcgccgccgtcgccggctgcctacctgcgggccgcagaggaagatccgtcgcaggcctac
gagcgtgccgacagcgaggacaaccagctgcagctgctgcgcgaaggcctggcggtgctg
gatgcacgctcgcgcgacatcattgcccgccgctggctcgatgccgacagcaaggtcacg
ctgcaggagctggctgacgaatacggcgtgtcggccgaacgcatccgccagatcgaggcg
aacgcgatgaagaagatgaaggcgctgctcgccgcctga
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