Pseudoxanthomonas daejeonensis: MNQ95_15280
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Entry
MNQ95_15280 CDS
T08066
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pdd
Pseudoxanthomonas daejeonensis
Brite
KEGG Orthology (KO) [BR:
pdd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdd03016
]
MNQ95_15280 (rnd)
Enzymes [BR:
pdd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
MNQ95_15280 (rnd)
Transfer RNA biogenesis [BR:
pdd03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
MNQ95_15280 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
UNK57465
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All DBs
Position
3408442..3409536
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AA seq
364 aa
AA seq
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MPETHWIDQPAELLRRLEHAPPRVGLDTEFIRERTYWPRLALVQMAVGDEILLVDPLVPG
MAAALAAWLDAPGVLKVMHSASEDLVAFKCTCGTLPRPMYDTQIAAALAGIGAGVGYQKL
VEQVTGVVLPKGETRSDWLRRPLSAAQLEYAADDVRHLAALYEATASRLRELGREAWLGE
DVDRLLANAAREEGEAWPHLSMRSAQFLDTAGQRRLLRVLRWRDRHAREHDHPRSWVLDN
ELAVTLSRDPPADAEALQRRLDAIPKSPRRLATAIWQALSTPLPDEESMPAPAADPDRQA
LKRLQDAVARRSAELALPDGVLASRRHLEALLEGAGWPVPLQGWRRGELESTLAPLLAPA
PTAG
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
gtgccagaaacccattggatcgaccagcccgccgaactcctgcgccgcctggagcacgct
ccgccccgcgtcgggctggataccgagttcatacgcgagcgcacctactggccacggctg
gccctggtgcagatggcggtaggcgacgagatcctgctggtcgacccgctggtcccgggc
atggccgccgccctggccgcctggctggacgcgccgggcgtactcaaggtgatgcacagc
gccagcgaggatctggtcgcgttcaagtgcacctgcggcaccctgccccggcccatgtac
gacacccagatcgccgcggcactggctggaatcggtgccggcgtgggctaccagaagctg
gtcgaacaggtcaccggggtggtcctgcccaagggcgagacgcgctcggactggctgcgc
cgtccgctcagcgcggcccagctcgaatacgccgccgatgacgtgcgccacctcgccgcg
ctgtacgaggccaccgcgagcaggctgcgtgaactcggccgcgaagcctggctgggcgag
gatgtcgatcgcctgctggccaacgccgcgcgcgaggaaggcgaggcgtggccgcacctg
tcgatgcgttcggcccagttcctggataccgccggccagcgccggctgctgcgcgtgctg
cgctggcgcgaccgccacgcgcgcgaacacgaccatccgcgcagctgggtgctggacaac
gagctggccgtgaccctgtcgcgcgatccaccggccgatgccgaggcgctgcagcggcgc
ctggatgcgatacccaagtcgccacgccgcctcgccacggcgatctggcaggcgctgtcc
acgcccctgcccgacgaggaaagcatgccggcgcccgcagccgacccggaccgccaggcg
ctcaagcgcctgcaggatgccgtggcccggcgcagcgccgagctggctcttcccgacggc
gtgctggcgtcgcgtcgccacctcgaagccttgcttgaaggcgcgggctggcccgtgccg
ttgcagggctggcgccgaggcgaactggaaagcacgctggcgcccctgttggcacccgcg
cccaccgcgggctag
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