Paracoccus denitrificans: Pden_0412
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Entry
Pden_0412 CDS
T00440
Name
(GenBank) ATP dependent DNA ligase
Organism
pde
Paracoccus denitrificans
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
DNA_ligase_A_N
Motif
Other DBs
NCBI-ProteinID:
ABL68526
UniProt:
A1AZ32
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Position
1:381210..382754
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AA seq
514 aa
AA seq
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MKAFAALLERLAFTPARNAKLQLLQHYLERTPDPDRGWALAALTGDLELRRVTPSLLRGL
AAERVDGELLALSYDFVGDLAETIALLWPEGAEDDPSLSQAVALLQGTGKAALPGAIAGM
LDRLGPSERLAFLKLATGNLRIGVSARMARTALAGMGVPSVPEIEEIWHGLAPPYAPLFG
WLGGGARPESAALAPFRPVMLSTPTDLDELRALDPGDYLAEWKWDGIRVQAVSEGGMRRL
YSRTGEDISHAFPDVIEAMDFDGTADGELIVRREGEVAPFGDLQKRLNRKTVGKGLLASH
PAGLRLYDLLLWDGRDLRAEPLGARRTVLEAVDFGPRIDISPLLDFATWEDLAALRAEPP
AAVIEGVMIKRRDSAYVAGRPRGPWFKWKRDPMVVDAVLIYAQRGHGKRSGFHSDFTFGL
WDGGELVPVGKAYFGFTDAELRELDRFVRQNTVERYGPVRALAPKLVVEVAFEGLNRSTR
HRSGVAMRFPRISRIRWDKPAAEADRLETLEAML
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcctttgccgcccttctggaacggctggccttcacgccggcgcgtaatgccaag
ctgcagcttttgcagcactatctggagcgcacgcccgacccggatcgcggctgggcgctg
gccgcgctgaccggcgatctggagttgcgcagggtcacgccctcgcttttgcgggggctg
gcggccgagcgggtggatggcgagcttctggcgctgagctacgatttcgtcggcgatctg
gccgaaaccattgcgctgctctggcccgagggggccgaggacgacccatcgctgtcccag
gcggtcgcgctgttgcaggggaccggcaaggcggcgctgcccggcgccatcgccggcatg
ctggaccggctgggcccgtccgagcggttggcctttctgaagcttgccaccggaaacctg
cgcatcggcgtttctgcccgcatggcgcggacggcgctggcggggatgggcgtgccctcg
gtccccgagatcgaggagatctggcacgggctcgcgccgccctatgcgccgctgttcggc
tggctgggcggcggggcgcggccggaaagcgcggcgctggcgccgttccggccggtgatg
ctgtccacgccgaccgacctggacgagctgcgcgcgctggaccccggcgattaccttgcg
gaatggaaatgggacggcatccgcgtgcaggcggtcagcgaaggcggcatgcggcggctg
tattcccgcacgggcgaggatatctcgcacgcctttcccgacgtgatcgaggcgatggat
ttcgacggcaccgccgatggcgagctgatcgtgcggcgcgagggcgaggtggcgcccttc
ggcgacctgcaaaagcggctgaaccgcaagaccgtcggcaaggggctgcttgccagccat
ccggcgggactgcggctttacgacctgctgctgtgggacggccgcgacctgcgcgccgag
ccgttgggcgcccgccgcaccgtgctggaagccgtggatttcgggccgcggatcgacatc
tcgcccctgctggactttgccacatgggaggatctggccgcgctgcgcgccgaaccgccc
gccgccgtcatcgagggggtgatgatcaagcggcgcgacagcgcctatgtcgccggccgg
ccgcgcgggccatggttcaagtggaagcgcgatccgatggtggtcgatgcggtgctgatc
tatgcgcagcgcgggcatggcaaacgctcgggctttcattccgacttcacctttggcctg
tgggatggcggcgaactggtgccggtgggcaaggcctatttcggctttacagatgccgaa
ctgcgcgagctggaccgcttcgtgcgccagaataccgtcgagcgttacggacctgtccgg
gcgctggcgccgaaactggtggtcgaggtggccttcgagggcttgaaccgctcgacccgg
caccgttcgggcgtggccatgcgctttccccgcatcagccgtatccgctgggacaagcct
gccgctgaggccgatcgtcttgaaacacttgaggcgatgctgtga
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