KEGG   Paracoccus denitrificans: Pden_0413
Entry
Pden_0413         CDS       T00440                                 
Name
(GenBank) DEAD/H associated domain protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pde  Paracoccus denitrificans
Brite
KEGG Orthology (KO) [BR:pde00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pde03400]
    Pden_0413
Enzymes [BR:pde01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Pden_0413
    5.6.2.6  RNA 3'-5' helicase
     Pden_0413
DNA repair and recombination proteins [BR:pde03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Pden_0413
SSDB
Motif
Pfam: DEAD_assoc Lhr_WH DEAD Helicase_C
Other DBs
NCBI-ProteinID: ABL68527
UniProt: A1AZ33
LinkDB
Position
1:382751..385186
AA seq 811 aa
MILPPEFQDWFVRQGWQPHPHQLALLAAEGDSLLIAPTGGGKTLAGFLPSLVDLARVGRS
QDGYLENGKGARTGLHTLYVSPLKALTADIGRNLARPVAELGLEIRVEDRTGDTGQGQRR
RQRVDPPEILLTTPESLALMLSYPEAPAIFGGLRRVVLDELHALAESKRGDQLMLGLARL
RRLAPGLRVTGLSATVEDPQALAGFMAGAALVTVVEADPGPDPDIAMLPTAKPAPWSGGG
GHYAIPEVLEAVKGARTTIIFINTRAQAELFFQALWAENDENLPIGLHHGSLAREQRARV
EAAMAAGELRAVVATGSLDLGIDWGAVDLVIQVGAPKNVKRLVQRIGRANHRYNAPSRAR
IVPANRFEQIECVAALEAVRERDLDGDRRGPGPLDVLCQHIGLTACAAPFDADALFAEVV
TAGPYRGLSRADFDACLDFAATGGYALRAYDRWQRLVLRAGLWQLRDPRAAKLLRMNVGT
IVEAEMMKVRLRGRGGAPLGEVEEAFAASLTHGDSFLIGGRVVRMDAMREMVIEVTPDPT
RQPKIAVYSGVKLAMSTQLSHRVLALIGDPARHGALPAQTREWLDLQAQVSALPEPGLLL
SESFPHAGLWHFALYGFAGRNALQTLGLLLTREMEDEGLGPLGFLSTDYALLVWSLDAVR
DPAPLLDRARLRAGLGDWLGENAVMKRTFRNVATVAGLTQRNMPGQRKTGRQATFSSDIL
YDTLRKYDPGHLMLRITAEEAGRGLVDFGRIEEMLDRSPRREHRMLERVSPMAAPLLLEV
GRVPIRGEGRERLAQIEAEALMAEAGLEGIA
NT seq 2436 nt   +upstreamnt  +downstreamnt
gtgatcctgccgcccgagttccaggactggttcgtgcggcagggctggcagccgcatccg
catcagctggccctgctggcggccgagggcgacagcctgctgatcgcgccgaccggcggc
ggcaagacgctggcggggtttctgccctcgctggtggacctggcgcgggtggggcggtcg
caagatgggtatttggaaaatggaaaaggcgccaggacggggctgcatacgctttacgtc
tcgccgttgaaggcgttgacggcggatatcggccgcaacctggcccggccggtggccgag
ctggggttggagattcgggtcgaggaccggaccggcgacaccgggcaaggccagcgccgc
cgccagcgcgtcgatccgcccgagatcctgctgacgacgccggaaagcctggccctgatg
ctgagctatcccgaggcgccggcgatctttggcggcttgcgccgggtggtgctggacgaa
ttgcacgcgctggcggaaagcaagcgcggcgaccagttgatgctggggctggcccggctg
cggcggctggcgcccgggttgcgggtgacggggctgtcggcgacggtcgaggatccgcag
gctttggcggggttcatggcgggtgctgctctggttaccgtggtcgaggccgatcccggc
cccgatcccgacatcgccatgctgcccaccgccaagcctgcgccatggtccggcggcggc
gggcattacgccatccccgaggtgctggaggcggtgaaaggcgcgcgcacgacgatcatc
ttcatcaacacccgcgcgcaggccgagctgttcttccaggcgctgtgggccgagaatgac
gagaacctgcccatcggcctgcatcacggcagcctggcgcgcgagcagcgggcgcgggtc
gaggcggcgatggcggcaggcgaactgcgcgccgtggtggcgaccggcagcctggacctg
ggcattgactggggcgccgtcgatctggtgatccaggtcggcgcgcccaagaacgtcaag
cggctggtccagcgtatcggccgggcgaaccatcgctataacgctccgtccagggcgcgg
atcgtgccggcgaaccgtttcgagcagatcgaatgcgtggccgctctggaggcggtgcgg
gagcgcgacctggacggcgatcggcgcgggccggggccgctggacgtgctatgccagcat
atcgggctgactgcctgcgccgcgcccttcgatgccgatgcgctttttgccgaggtcgtt
accgccggcccctatcgtgggctgagccgggcggatttcgatgcctgcctggatttcgcc
gcgaccgggggctatgcgctacgcgcctatgaccgctggcagcggctggtgctgcgggct
gggctgtggcagctgcgcgacccgcgggcggcgaagctgttgcgcatgaatgtcggcacc
atcgtcgaggccgagatgatgaaggtccggctgcgcggccgcggcggtgcgcctttgggc
gaggtcgaggaggcattcgccgccagcctgacccacggcgacagcttcctgatcggcggc
cgggtcgtgcgcatggatgcgatgcgcgagatggtgatcgaggtcacgcccgacccgacc
cgacagcccaagatcgcggtctattccggcgtcaagctggccatgtcaacgcagctttcc
catcgcgtgctggcgctgatcggcgatccggcgcggcacggcgccttgccggcgcagacg
cgggaatggctggatttgcaggcccaggtctcggccctgccggaaccggggctgttgctg
tcggaaagctttccccatgcgggcctgtggcatttcgcgctttacggctttgccggccgc
aatgccttgcagacgctgggcctgctgctgacccgcgagatggaggacgaggggctgggg
cctctgggtttcctgtccaccgattacgcgctgctggtctggtcgctggacgcggtgcgc
gatcccgcgccgctgttggaccgggcgcggctgcgggcgggcctgggcgactggttgggc
gagaatgcggtgatgaagcgcaccttccgcaatgtcgccaccgtcgccgggctgacccag
cgcaacatgccggggcagcgaaaaaccgggcggcaggcgaccttttccagcgacattctc
tatgacacgctgcgcaaatacgatcccggccacctgatgctgcgcatcaccgccgaggag
gcggggcggggccttgtcgatttcggccggatcgaggagatgctggaccgctcgccccgg
cgcgagcatcggatgctggagcgggtctcgcccatggccgcgcccctgctgctggaggtc
ggccgggtgccgatccgcggcgaggggcgcgagcggctggcgcagatcgaggccgaggcg
ctgatggccgaggccgggctggaagggatcgcatga

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