Paracoccus denitrificans: Pden_0587
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Entry
Pden_0587 CDS
T00440
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
pde
Paracoccus denitrificans
Pathway
pde00300
Lysine biosynthesis
pde00550
Peptidoglycan biosynthesis
pde01100
Metabolic pathways
pde01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pde00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Pden_0587
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Pden_0587
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Pden_0587
Enzymes [BR:
pde01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
Pden_0587
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GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
ABL68699
UniProt:
A1AZK5
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All DBs
Position
1:559181..560566
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AA seq
461 aa
AA seq
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MTLWTSQDAAEATGGRATRDFAVGGVSIDTRTIRPGDLFVALQAARDGHDFVARALEKGA
CAALVSRIPEGVAPDAPLLVVPDVLPALEALGRAGRARMRGKVVAITGSVGKTSTKEMAR
VALAGQGRVHAAEASYNNHWGVPLTLARMPEDTDFAIVEIGMNHPGEIEPLARLARPHVA
MVTTVAAAHLEAFGAIEGIAREKGAIFRGLIQPGTAIIPEDLPVTQLLRDCADDAAAIVI
GFGQQGMARPLKAETLDGVTRVRARVLGETVDFMLASAGTHFVMNAVGMLAALSAAGADV
AEAAKHLSDWRPPLGRGAVEDLDGIRLIDDAYNSNPTSLSAGLATLARLTGGRRVAILGD
MLELGPDEIALHAGMAGDPAMEAVDLVHTAGPRMRALHEALPQGRRGMHAETAAELAGKV
GELVASGDIVLVKGSKSSKVSTVVDALRRTRQSTPPGERTA
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgacgctctggacctcgcaggatgccgccgaggccaccggcggccgtgccacccgtgat
ttcgcggtcggcggcgtttccatcgacacccgcaccatccggccgggcgacctgtttgtc
gccctgcaagccgcccgcgacggccatgacttcgtcgcccgggcgctcgagaagggtgcc
tgcgccgcgctggtcagccgcatccccgaaggcgtggcgccggatgcgccactgctggtc
gtccccgatgtcctgccggcactggaggccttgggccgcgccggtcgcgcccggatgcgg
ggcaaggtcgtcgccatcaccggctcggtcggcaagacctcgaccaaggagatggcccgc
gtcgccctggccgggcagggcagggtccacgcggccgaggccagctacaacaaccattgg
ggcgtgcccctgacgctggcgcgcatgcccgaggacaccgacttcgccattgtcgagatc
ggcatgaaccatccgggcgagatcgagccccttgcccgccttgcccgcccgcatgtcgcc
atggtcaccaccgttgccgccgcgcatctggaagccttcggcgccatcgagggcatcgcc
cgcgaaaagggcgcgatctttcgcggtctgatccagcccggcaccgccatcatccccgag
gatctgcccgtcacgcaactgctgcgcgactgtgccgacgatgccgccgccatcgtgatc
ggcttcggccagcagggcatggccaggccgctcaaggccgagaccctggacggcgtgacc
cgggtccgcgctcgcgtgctgggcgagacggtggatttcatgctcgccagcgccggcacg
catttcgtgatgaacgcggtcggcatgctggccgcgctttccgccgccggggcggatgtg
gccgaggcggcgaagcacctgtccgactggcgcccgccgctgggtcgcggcgccgtcgag
gatctggacggcatccggctgatcgacgatgcctacaactccaatccgacctcgctttcc
gccggcctcgcgacgctggcgcggctgaccggcgggcgccgggtggcgatcctgggggac
atgctggaactcggcccggacgagatcgcgctccatgccggcatggccggggaccccgcg
atggaagccgtcgacctggtccataccgccggcccgcgcatgcgcgccctgcacgaggcg
ctgccgcaaggccggcgcggaatgcatgccgagacggccgccgaactggccgggaaagta
ggcgaactggtcgcgtccggcgatatcgtgctcgtgaagggttcgaagtcctccaaggtc
tcgacggtggttgacgcgctgcggcgaacgcgccaaagcacgccccctggcgaaaggaca
gcgtaa
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