Paracoccus denitrificans: Pden_0589
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Entry
Pden_0589 CDS
T00440
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pde
Paracoccus denitrificans
Pathway
pde00470
D-Amino acid metabolism
pde00550
Peptidoglycan biosynthesis
pde01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pde00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Pden_0589
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Pden_0589
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pde01011
]
Pden_0589
Enzymes [BR:
pde01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
Pden_0589
Peptidoglycan biosynthesis and degradation proteins [BR:
pde01011
]
Precursor biosynthesis
Amino acid ligase
Pden_0589
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
2-Hacid_dh_C
KARI_N
TrkA_N
MurD-like_N
AlaDh_PNT_C
ApbA
NAD_binding_2
NAD_Gly3P_dh_N
F420_oxidored
Motif
Other DBs
NCBI-ProteinID:
ABL68701
UniProt:
A1AZK7
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All DBs
Position
1:561731..563131
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AA seq
466 aa
AA seq
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MIPVQGVQNQTIAVLGLGRSGRATAAALAAGGARVVAWDDGVDTREQAEQEGLHLLDLTQ
DQNWDGISALIASPGIPHLYPKPHPVIARAYALGVPVDNDIGLFFRSFATAEWERFDTTP
RVIAVTGSNGKSTTTALIHHILKETGRPTQIGGNIGTGVLSLDPAHDGEVVVLELSSYQT
DLARALTPDVAVFTNLSPDHLDRHGGLGGYFAAKRRLFAEGGPDRAVIGVDEVEGRYLAG
QLGMGAADDRVIRVSSGQKLEGFGWSVFARKGYLAEYRKGRQVASIDLRGIQGLPGAHNH
QNACAAYAAARAVGIAPREIERAFHSFQGLPHRSQTVAEIGGVAWVNDSKATNVDAAAKA
LAAFPRIRWIAGGMGKDGGIEALAPCLGPVVKAYLIGHSARDFALQIGQTPYEIVETMEQ
AVARAAAEAQPGETVLLAPAAASFDQYPNFEKRGEHFTALVKALQA
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgattccggtccagggcgtccagaaccagaccatcgccgtgctcggcctcgggcgttcg
ggccgcgccaccgccgctgcgcttgccgccggcggcgcccgggtcgtcgcctgggacgac
ggcgtcgacacgcgcgaacaggccgagcaagagggcctgcatctcctcgacctgacccag
gaccagaactgggacggcatctcggcgctgatcgccagccccggcatcccgcatctctat
ccgaaaccgcatccggtcatcgccagggcctacgcgctcggcgtgccggtggacaacgat
atcggcctgttcttccgcagcttcgccaccgccgaatgggagcgcttcgacaccaccccg
cgtgtcatcgccgtcaccggctcgaacggcaagtccaccaccacggcactgatccaccac
atcctcaaggaaaccggccgtccgacccagatcggcggcaatatcggcaccggcgtgctg
tcgctcgatccggcccatgacggcgaggtggtggtgctggagctctccagctaccagacc
gaccttgcccgcgccctgacccccgacgtggcggtcttcaccaatctctcgcccgaccat
ctggaccgccatggcggtcttggcggctatttcgccgccaagcgccggcttttcgccgag
ggcgggccggatcgcgccgtgatcggcgtggacgaggtagaggggcgctatctcgccggc
cagctcggcatgggtgccgccgacgaccgggtgatccgcgtctcgtccggccagaagctg
gaaggcttcggctggtcggtctttgcccgcaagggctacctcgcggaataccgcaagggc
cgccaggtcgcctcgatcgacctgcgcggcatccagggcctgccgggcgcacacaaccac
cagaacgcctgcgcagcctatgccgcggcgcgcgccgtcggcatcgccccgcgcgagatc
gagcgcgccttccacagcttccagggcttgccgcatcgcagccagaccgtggccgagatc
ggcggcgtggcctgggtcaacgacagcaaggccaccaatgtcgatgccgccgccaaggcg
ctggccgctttcccgcgcatccgctggatcgccggcggcatgggcaaggatggcggcatc
gaggcgctggccccctgcctcggcccggtggtgaaggcctatctgatcggacattccgcc
cgcgacttcgcgctccagatcggccagaccccctatgagatcgtcgaaaccatggagcag
gctgtcgcccgcgccgcggccgaggcccagccgggcgagaccgtgctgctcgcccccgcc
gccgccagcttcgaccaatacccgaacttcgagaaacggggcgagcatttcaccgccctg
gtcaaggcgctgcaggcctga
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