Paracoccus denitrificans: Pden_0749
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Entry
Pden_0749 CDS
T00440
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
pde
Paracoccus denitrificans
Pathway
pde03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pde00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Pden_0749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pde03021
]
Pden_0749
03400 DNA repair and recombination proteins [BR:
pde03400
]
Pden_0749
Enzymes [BR:
pde01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Pden_0749
Transcription machinery [BR:
pde03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Pden_0749
DNA repair and recombination proteins [BR:
pde03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Pden_0749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
ABL68861
UniProt:
A1B017
LinkDB
All DBs
Position
1:732340..736548
Genome browser
AA seq
1402 aa
AA seq
DB search
MNQELATNPLNPLAAPRQFDEIKISLASPEEILAWSYGEVKKPETINYRTFKPERDGLFC
ARIFGPIKDYECLCGKYKRMKYRGLVCEKCGVEVTLQKVRRERMGHIELAAPVAHIWFLK
SLPSRIGLMLDMTLRDLERILYFENYVVIEPGLTDLSYGQLLTEEEFLDAQDQYGADAFT
ANIGAEAIREMLANIDLAATAEQLREELKEATGELKPKKIIKRLKIVESFLESGNRPEWM
VLTVIPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIVRNEKR
MLQESVDALFDNGRRGRVITGNNKRPLKSLSDMLKGKQGRFRQNLLGKRVDFSGRSVIVT
GPELKLHQCGLPKKMALELFKPFIYSRLEAKGLSSTVKQAKKLVEKERPEVWDILDEVIR
EHPVLLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSLEAQ
LEARVLMMSTNNVLSPANGAPIIVPSQDMVLGLYYTTMEREGMKGEGMAFTSLEEVEHAL
ASGAVHLHARITARLPQIDENGNEVITRFETTPGRLRLGALLPKNAKAPFELVNRLLRKK
DIQNVIDTVYRYCGQKESVIFCDQIMGLGFREAFRAGISFGKDDMVVPPTKWDLVEETQD
QVKQFEQQYLDGLITQGEKYNKVVDAWSKCNDRVTDAMMKTISATKKDEKGAELEPNSVY
MMAHSGARGSVSQMKQLGGMRGLMAKPNGEIIETPIISNFKEGLTVLEYFNSTHGARKGL
SDTALKTANSGYLTRRLVDVAQDCIIREHDCGTDHAITASAAVNDGEVVSPLSERVLGRV
AAEDVLVPGEDVVIVRKNELIDERKADEIEAAGVQNVRIRSALTCESDDGVCALCYGRDL
ARGTLVNIGEAVGIIAAQSIGEPGTQLTMRTFHIGGIAQGGQQSFIAAAQEGTVAFENES
TLENANGELIVMSRNMQLHIKSATGDTLASHKLFYGSKLFVREGDAVARGQKMFEWDPYT
LPIIAEKAGVAKYVDLISGISVRDETDDATGMTQKIVTDWRSAPKGNELKPEIIIVDQDG
EPVRNEQGNPVTYPMSVEAILSVEDGQEIKAGDVVARIPREGAKTKDITGGLPRVAELFE
ARRPKDHAIIAEIDGYVRFGKDYKNKRRIAIEPADDTLEPVEYMVPKGKHIPVQEGDFVQ
KGDYIMDGNPAPHDILRIMGIEALADYLIDEVQDVYRLQGVKINDKHIEVIVRQMLQKIE
ILDSGDTTLLKGEHVDRDEFEEENAKIEAKGGRQATGEPVLLGITKASLQTRSFISAASF
QETTRVLTEAAVQGKRDKLVGLKENVIVGRLIPAGTGGATARVRRIATDRDQEVIEARRA
EAEAAAALIAPEDTPAEVGGED
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggaacttgccaccaatcccctgaacccgctggctgcgccgcggcagttcgac
gaaatcaagatctcgctggcctcgcccgaggaaatcctcgcctggtcctatggcgaggtg
aagaagcccgaaaccatcaactaccgcacgttcaagcccgagcgtgacggcctgttctgc
gcgcgcatctttggcccgatcaaggattacgaatgcctttgcggcaaatacaagcgcatg
aagtatcgcggcctggtctgcgagaaatgcggcgtcgaggtgacgctgcaaaaggtccgg
cgcgagcgcatgggccatatcgagctggccgccccggtcgcgcatatctggttcctgaag
tcgctgccgagccgcatcggcctgatgctggacatgacgctgcgcgatcttgagcgcatc
ctctatttcgaaaactacgtcgtcatcgagccgggcctgacggacctttcctatggccaa
ctgctgaccgaggaggagttcctcgacgcgcaggaccagtatggcgccgacgccttcacc
gccaatatcggcgccgaggcgatccgcgagatgctggccaatatcgacctggccgccacc
gccgagcagctgcgcgaggagctgaaggaggcgaccggcgaattgaagccgaaaaagatc
atcaagcggctgaagatcgtcgaaagcttcctggaatcgggtaaccgtcccgaatggatg
gtgctgaccgtgatcccggtcatcccgccggaactgcgtccgctggtgccgctggacggc
ggccgcttcgcgacctcggacctgaacgacctctatcgccgggtcatcaaccgcaacaac
cgcctcaagcgcctgatcgagctgcgcgcacccgacatcatcgtgcgcaacgaaaagcgg
atgctgcaggaatcggtcgatgcgctgttcgacaacggccgccgcggccgcgtgatcacg
ggcaacaacaagcgcccgctgaaatcgctgtccgacatgctgaagggcaagcagggccgc
ttccgccagaacctgctgggcaagcgggtggacttctcgggccgctcggtcatcgtgacc
gggccggagctgaagctgcaccagtgcggcctgcccaagaagatggcgctggagctgttc
aagccgttcatctattcgcggcttgaagcgaagggtctgtcctcgaccgtcaagcaggcc
aagaagctggtcgagaaggaacgccccgaagtctgggacatcctggacgaggtgatccgc
gagcatccggtgctgctgaaccgtgcgccgacgctgcaccggctgggcatccaggccttc
gagcccatcctgatcgaaggcaaggcgatccagctgcacccgctggtctgctcggccttc
aacgccgacttcgacggcgaccagatggccgtgcacgtcccgctgtcgcttgaggcgcag
ttggaagcgcgcgtgctgatgatgtccaccaacaacgtgctgtcgcccgccaacggcgcg
ccgatcatcgtgccgtcgcaggacatggtccttggtctctactacacgaccatggagcgc
gagggcatgaagggcgagggcatggccttcaccagccttgaggaagtggaacacgcgctg
gcctccggcgcggtgcatctgcatgcccgcatcaccgcccgcctgccgcagatcgacgag
aacggcaacgaggtcatcacccgtttcgaaaccacgcccggccgcctgcgcctgggcgcg
ctgctgcccaagaacgcgaaagcgcctttcgagctggtgaaccgcctgctgcgcaagaag
gacatccagaacgtcatcgacaccgtctatcgctactgcggccagaaggaatcggtgatc
ttctgcgaccagatcatgggcctcggcttccgcgaggcgttccgcgccggcatctccttc
ggcaaggacgacatggtcgtgccgccgacgaaatgggatctggtcgaggaaacccaggat
caggtcaagcagttcgagcagcaatacctggacggcctgatcacccagggcgagaaatac
aacaaggtcgtcgatgcctggtcgaaatgtaacgaccgcgtcaccgacgccatgatgaag
accatctcggccaccaagaaggacgagaagggcgccgaactggagccgaactcggtctac
atgatggcccattcgggcgcgcggggctcggtcagccagatgaagcagctgggcggcatg
cggggcctgatggccaagccgaacggcgagatcatcgagacgccgatcatctcgaacttc
aaggaaggcctgaccgttcttgaatacttcaactcgacccacggcgcgcgcaagggtctg
tcggataccgctctgaagacggcgaactcgggttacctgacccgccgtctggtggacgtg
gctcaggactgcatcatccgcgagcatgattgcggcaccgatcacgcgatcaccgcctcg
gcggcggtcaacgacggcgaggtggtcagcccgctttccgagcgcgtgctgggccgcgtc
gccgccgaggacgtgctggtcccgggcgaggacgtggtgatcgtgcgcaagaacgagctg
atcgacgagcgcaaggccgacgagatcgaggcggcgggcgtgcagaacgtgcgcatccgc
tcggccctgacctgcgaatccgacgacggggtctgcgcgctttgctatggccgcgacctg
gcccgcggcacgctggtcaatatcggcgaggcggtcggcatcatcgccgcccagtccatc
ggcgagccgggcacccagctgacgatgcggaccttccacatcggcggcatcgcccagggt
ggccagcagtccttcatcgccgcggcgcaggagggcacggtggctttcgagaacgaaagc
acgctggaaaacgccaatggcgagctgatcgtgatgagccgcaacatgcagctgcacatc
aagtcggccaccggcgacacgctggccagccacaagctgttctacggctcgaaactgttc
gtgcgcgagggcgatgccgtcgcccgcgggcagaagatgttcgaatgggatccctacacc
ctgccgatcatcgccgagaaggccggtgtggcgaaatatgtcgatctgatctcggggatc
tcggtccgcgacgagaccgacgacgcgaccggcatgacgcagaagatcgtgacggactgg
cgctcggcccccaaaggcaacgagctgaagcccgagatcatcatcgtcgatcaggatggc
gagccggtgcgcaacgagcagggcaacccggtcacctatccgatgtcggtcgaggcgatc
ctgtcggtcgaggacgggcaggaaatcaaggccggcgacgtggtggcgcgtatcccgcgc
gaaggcgccaagaccaaggacatcaccgggggtctgccccgcgtggcggaactgttcgag
gcccgtcgtcccaaggatcacgccatcatcgccgagatcgacggctatgtgcgctttggc
aaggactacaagaacaagcgccgcatcgccatcgagcccgccgacgacacgctggagccg
gtcgaatacatggtgccgaaaggcaagcacatcccggtgcaggaaggcgacttcgtgcag
aagggcgactacatcatggacggcaacccggcgccgcatgacatcctgcgcatcatgggt
atcgaggctttggccgattacctgatcgacgaggtgcaggacgtctaccggctgcaaggc
gtgaagatcaacgacaagcacatcgaggtgatcgtgcggcagatgctgcagaagatcgag
atcctcgacagcggcgacaccacgctgctgaagggcgagcatgtcgaccgtgacgagttc
gaggaagagaacgccaagatcgaagccaagggcggccgtcaggccacgggcgagccggtg
ctgctgggcatcaccaaggcgtcgctgcaaacccgcagcttcatctcggccgcctcgttc
caggagacgacccgcgtgctgaccgaggccgccgtccagggcaagcgcgacaagcttgtc
gggctcaaggagaacgtcatcgtcggccggctgatcccggccggcaccggcggggccacc
gctcgcgtgcgccgcatcgcgaccgaccgcgaccaggaggtgatcgaggcgcgccgcgcc
gaggcggaagctgccgccgcgctgatcgcgccggaagacaccccggccgaggtcggcggc
gaggactga
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integrated database retrieval system
