Paracoccus denitrificans: Pden_0920
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Entry
Pden_0920 CDS
T00440
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pde
Paracoccus denitrificans
Pathway
pde00260
Glycine, serine and threonine metabolism
pde00460
Cyanoamino acid metabolism
pde00630
Glyoxylate and dicarboxylate metabolism
pde00670
One carbon pool by folate
pde00680
Methane metabolism
pde01100
Metabolic pathways
pde01110
Biosynthesis of secondary metabolites
pde01120
Microbial metabolism in diverse environments
pde01200
Carbon metabolism
pde01230
Biosynthesis of amino acids
pde01240
Biosynthesis of cofactors
pde04981
Folate transport and metabolism
Module
pde_M00140
C1-unit interconversion, prokaryotes
pde_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Pden_0920
09102 Energy metabolism
00680 Methane metabolism
Pden_0920
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Pden_0920
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Pden_0920
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Pden_0920
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Pden_0920
Enzymes [BR:
pde01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Pden_0920
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ABL69031
UniProt:
A1B0I7
LinkDB
All DBs
Position
1:complement(901497..902780)
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AA seq
427 aa
AA seq
DB search
MTDTGFFTETLDSRDPDIFGAIRKELGRQRDEIELIASENIVSRAVLEAQGSVLTNKYAE
GYPGKRYYGGCQYVDIVEELAIERAKQLFGCEFANVQPNSGSQMNQAVFLALLQPGDTFM
GLDLNSGGHLTHGSPVNMSGKWFNVVSYGVRQQDQLLDMDEIRKKAHEHKPKLILAGGTA
YSRVWDWAEFRKIADEVGAWLMVDMAHIAGLVAGGQHPSPLPNAHVVTTTTHKSLRGPRG
GMVLTNDADIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALRPDFKDYAAQVVANARAM
ADELMKGGIDIVSGGTDNHLCLADLRPKGVTGKATEAALGRAHITCNKNGVPFDPEKPFV
TSGIRLGAPAGTTRGFKEDEFRQIARWIVEVVDGLAANGEEGNAEVEARVKAEVEALCAR
FPLYNGL
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaccggattcttcaccgagacgctggacagccgcgaccccgacattttcggc
gccatccgcaaggaactcggccgccagcgcgacgagatcgagctgatcgcatcggaaaac
atcgtctccagggccgtgctggaagcgcagggctcggtgctgaccaacaaatatgccgag
ggctatccgggcaaacgctattacggcggctgccaatatgtcgacatcgtcgaggaactg
gcgatcgagcgtgccaagcagctgttcggctgcgaattcgccaacgtccagccgaactcg
ggcagccagatgaaccaggcggtgttcctggcgctgctgcagccgggcgataccttcatg
gggctggacctgaactcgggcgggcacctgacgcacggctcgccggtgaacatgtcgggc
aaatggttcaacgtcgtcagctacggcgtgcgccagcaggaccagctgctggacatggac
gagatccgaaagaaggcgcatgagcacaagcccaagctgatcctggccggcggcaccgcc
tattcgcgcgtctgggactgggccgaattccgcaagatcgcggatgaggtcggcgcctgg
ctgatggtggacatggcccatatcgcgggcctggtggccggcggccagcatccctcgccg
ctgccgaatgcccatgtcgtgaccaccaccacccacaagtcgctgcgcggcccgcgcggg
ggcatggtgctgaccaacgacgccgacatcgcgaaaaagatcaactcggccgtcttcccc
ggccttcagggcggcccgctgatgcatgtcatcgccgccaaggccgtggccttcggcgag
gcactgcgtcccgacttcaaggactatgccgcgcaagtcgtcgccaatgcgcgtgccatg
gcggacgagctgatgaagggcggcatcgacatcgtctcgggcggcaccgacaaccacctc
tgcctggccgacctgcgcccgaaaggcgtgaccggcaaggcgaccgaggcggcgctgggt
cgcgcccatatcacctgcaacaagaacggcgtgcccttcgaccccgaaaagcccttcgtg
acctcgggcatccgcctgggcgcccccgccggcaccacccgcggcttcaaggaggacgaa
ttccgccagatcgcccgctggatcgtcgaggtcgtcgacggccttgccgccaatggcgag
gaaggcaatgccgaggtcgaggcccgcgtcaaggccgaggtcgaggcgctttgcgcccgc
ttcccgctctataacggcctgtaa
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