Paracoccus denitrificans: Pden_1290
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Entry
Pden_1290 CDS
T00440
Name
(GenBank) Orn/DAP/Arg decarboxylase 2
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pde
Paracoccus denitrificans
Pathway
pde00300
Lysine biosynthesis
pde00470
D-Amino acid metabolism
pde01100
Metabolic pathways
pde01110
Biosynthesis of secondary metabolites
pde01120
Microbial metabolism in diverse environments
pde01230
Biosynthesis of amino acids
Module
pde_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pde00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Pden_1290
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Pden_1290
Enzymes [BR:
pde01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Pden_1290
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ABL69395
UniProt:
A1B1K1
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All DBs
Position
1:complement(1251889..1253133)
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AA seq
414 aa
AA seq
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MCSPLTDLDRHLAEAAARFGTPAYVYATDVVEERLAHLRAHLGRWFAVSFAVKSNPNPAL
LGWMRDRLDYLDISSGGELALGREAGWDAARISFTGPAKREAELRAAIEAGLGELVLESL
REARLADAVAAEMGRVQPVLVRLAPARVPKGFGDQMAGRPSPFGVDVEDAAEILPQIAAL
PNLRIIGLHIYSGTQCLKPEAICENWRIFMQVFRDTCAALDLRPEKLIFGAGLGIPYHPG
DSALDLAAIAAEIGPELDAFRAEPRLADARLVLELGRYLVGPAGWFVTRVLSVKQSRGTR
IAICDGGLNDNLAASGNFGMVLRRNYVMHRVGGDEDGTRPEEKQDISGPLCTSIDKLGGG
VALPRLEEGDLIAIHACGAYGPTASPLHFISHPMPAEVLLTGGQMQDVTRIRDR
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtgcagtcccttgactgacctggaccgccacctggccgaggcggcggcgcgcttcggc
accccggcctatgtctatgccaccgacgtggtcgaggaacggctggcccatctgcgcgcg
catctgggtcgctggttcgccgtcagcttcgcggtgaaaagcaatccgaaccccgccctg
ctgggctggatgcgggaccggctggattacctcgacatttcctcgggcggcgagctggcc
ctggggcgcgaggcgggttgggatgcggccaggatcagcttcaccggcccggccaagcgc
gaggcggaactgcgcgccgccatcgaggcgggcctgggcgagctggtgctggaaagcctg
cgcgaggcgcggctggccgatgccgtcgcggccgagatgggccgcgtccagccggtgctg
gtccgccttgcgccggcgcgggtgcccaagggcttcggcgaccagatggccgggcggccc
agccccttcggcgtcgatgtcgaggacgcggccgagatcctgccgcagatcgccgccctg
ccgaacctgcgcatcatcgggctgcacatctattccggcacgcaatgcctcaagcccgag
gcgatctgcgagaactggcgcatcttcatgcaggtgttccgcgacacctgcgccgcgctg
gacctgcgcccggaaaagctgatcttcggcgccgggctcggcatcccctaccaccccggg
gacagcgcgctggaccttgcggccatcgcggccgagatcggccccgaactcgacgccttc
cgcgccgagccgcgccttgccgacgcccggctggtgctggagctgggccgctacctggtc
gggccggcgggctggttcgtgacccgtgtcctgtcggtcaagcaatcgcgcggcacccga
atcgccatctgcgacggcgggctgaacgacaacctggcggcctcgggcaatttcggcatg
gtcttgcggcgcaattacgtcatgcaccgcgtcggcggcgacgaagacggcacccgaccc
gaggaaaagcaggatatttccggcccgctctgcacctcgatcgacaagctgggcggcggc
gtcgcgctgcctcggctggaggaaggcgacctgatcgccatccatgcctgcggcgcctat
gggccgacggcgagcccgctgcatttcatcagccaccccatgccggccgaggtgttgctg
accggcgggcagatgcaggacgtgacgcgaatccgggacaggtga
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