Paracoccus denitrificans: Pden_1762
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Entry
Pden_1762 CDS
T00440
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pde
Paracoccus denitrificans
Pathway
pde03030
DNA replication
pde03430
Mismatch repair
pde03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Pden_1762
03430 Mismatch repair
Pden_1762
03440 Homologous recombination
Pden_1762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pde03032
]
Pden_1762
03400 DNA repair and recombination proteins [BR:
pde03400
]
Pden_1762
Enzymes [BR:
pde01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Pden_1762
DNA replication proteins [BR:
pde03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Pden_1762
DNA repair and recombination proteins [BR:
pde03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Pden_1762
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
DUF655
Motif
Other DBs
NCBI-ProteinID:
ABL69859
UniProt:
A1B2W5
LinkDB
All DBs
Position
1:complement(1748469..1751939)
Genome browser
AA seq
1156 aa
AA seq
DB search
MPENSPRFIHLRTHSEHSLLEGAVPVKKLADLAAQNGMPAVALTDSNALFAALEFSVKAQ
DAGVQPIIGCQVTLAAEATGPVVLLAQNEAGWLNLMELSTCLYLRDDHALPHVTPEELAA
HAEGLICLTGGAGGPLGQLVLQGRQAEARALAERLAAAFPTRLYVELQRHHDAEGQPVPE
ETGSEGGMIDIAYALDLPLVATNDVYFPKPELFDAHDALICISERAYVDQTAPRRRLTPQ
HYFKSAAEMATLFADLPEAIRNTVEIARRCAFAVKKHKPILPRFADDEVEELRRQAWDGL
RARLAVIPHSATVEEYEERLRFELGIIEQMGFPGYFLIVADFIKWAKEHNIPVGPGRGSG
AGSLVAYALTITDLDPIRYSLLFERFLNPERVSMPDFDIDFCMDRREEVIQYVQEKYGRD
KVGQIITFGALLSKAAVRDVGRVLQLPFGQVDRLSKMIPVEGVKPVSVTKALADEPRLRE
AAREEVVNRLLDYAAKIEGLLRNASTHAAGVVIGDRPLHRLVPLYRDPASDMPATQFNMK
WVEQAGLVKFDFLGLKTLTVIQNAVDLINDGGRPLHVAADGRQLYEPAKGAENQINAIPL
DDKPSYDLFASARTVAVFQVESSGMMDALRRMKPTCIEDIVALVALYRPGPMENIPTYCE
VKNGLRPLESIHPSIDDILAETQGIIVYQEQVMQIAQVMAGYSLGGADLLRRAMGKKIAE
EMAKERPKFVEGCKAQGIDTKKAGEVFDLLEKFANYGFNKSHAAAYAVVSYQTAWLKANH
PVEFMAAVMNCDIHLTDKLAVYKREADRMGIETVPPCVNRSEALFSVKDGKILYALGALK
GVGVEAMNLIVQARAGRPFADMHDFARRVDMRRVGKRPLEMLARAGAFDALEPNRARVLK
SLDGLVAWSTAVQEAAASSQSSLFGGGEDLPPPRPVAAPVWMPAEKLAEEHAAVGFYLSG
HPLDDYQPALRRKGVQTLAEVTQAAADGALVAQLAGTVAHRQEKKSARGTRFAFVGLSDP
TGLYEVTVFSDTLDAHRQHLEPGANVVLQVQVEPSGDQVKLLARSVMPLDQAVADAGANR
LAVEIAGLDAVPGIAEALARIQAELNAPARARGPISLRLKDGADLVDIEIAEDAPLTTPA
RQALRVVPGVLEVVEE
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgccggaaaattctccccgattcatccacctgcgcacacattccgaacattcgctgctg
gaaggcgcggtgccggtcaagaaactcgccgatcttgcggcgcagaacggcatgcccgcc
gtggcgctgaccgacagcaacgccctgttcgcggcgctggaattctcggtcaaggcgcag
gatgcgggcgtgcagccgatcatcggctgccaggtgacgcttgctgccgaggcgaccggc
cccgtcgtgctcttggcgcagaacgaggcgggctggctgaacctgatggagctttccacc
tgcctctacctgcgcgacgaccatgccttgccgcatgtgacgcccgaggaactcgcggcc
catgccgaggggctgatctgcctgaccggcggcgccggcggcccgctggggcaactggtg
ctgcaaggccgacaggccgaggcgcgcgcgctggccgagcggctggcggccgccttcccg
acacggctttacgtcgagttgcagcgccatcacgatgccgagggccagccggttcccgag
gagacagggtccgaaggcggcatgatcgacatcgcctatgcgctcgacctgccgctggtc
gccaccaacgacgtctatttccccaagcccgagctgttcgacgcgcatgacgcgctgatc
tgcatttccgaacgcgcctatgtcgaccagaccgcgccgcgccgccggctgacgccgcag
cactacttcaagtccgccgccgagatggcgacgctgttcgccgatctgcccgaggcgatc
cgaaacaccgtcgagatcgcccgccgctgcgcctttgccgtcaagaagcacaagcccatc
ctgccgcgctttgcagatgacgaggtcgaggaactgcgccgccaggcctgggatggcttg
cgcgcccggctggcggtgatcccgcattccgcgacggtcgaggaatacgaggagcggctg
cgcttcgaactgggcatcatcgagcagatgggctttcccggctatttcctgatcgtcgcc
gatttcatcaaatgggccaaggaacataacatcccggtcgggccgggccggggctcgggc
gcgggctcgctggtcgcctatgcattgacgattaccgacctggatccaatccgttacagc
ctgctcttcgagcggtttctgaaccccgagcgggtctcgatgcccgacttcgacatcgac
ttctgcatggatcgccgcgaggaggtgatccaatatgtgcaagagaaatacggccgcgac
aaggtgggccagatcatcaccttcggcgcgctcttgtccaaggccgcggtgcgcgacgtg
ggccgggtgctgcagctgccctttggccaggtggaccggctcagcaagatgatcccggtc
gagggcgtcaagcccgtcagcgtcaccaaggcgctggccgacgagccgcgcctgcgcgag
gcggccagggaagaggtggtgaaccgcctgctggactatgccgccaagatcgaggggctc
ttgcgcaatgcctcgacccatgccgccggcgtggtgatcggcgaccggccgctgcaccgg
ctggtgccgctttaccgcgacccggcatcggacatgccggcgacgcagttcaacatgaaa
tgggtcgagcaggcggggctggtcaagttcgacttcctgggcctgaaaaccctgacggtg
atccagaacgcggtggacctgatcaacgacggcggccggccgctgcatgtcgcggcagac
gggcgccagctttacgagcccgccaagggggccgagaaccagatcaacgccatcccgctg
gacgacaagcccagctacgatcttttcgccagcgcccgcacggtcgcggtgttccaggtc
gaaagctcgggcatgatggacgcgctgcggcgcatgaagccgacctgcatcgaggacatc
gtggcgctggtggcgctgtatcgtcccggcccgatggagaacatcccgacctattgcgag
gtgaagaacggtctgcgaccccttgaatccattcacccttcgatcgacgacatcctggcc
gagacgcagggcatcatcgtctatcaggaacaggtgatgcagatcgcgcaggtcatggcc
ggctattcgctgggcggcgccgacctgctgcgccgcgccatgggcaagaagatcgccgag
gagatggccaaggaacggccgaaattcgtcgagggttgcaaggcgcagggaatcgacacg
aagaaggccggagaggtctttgaccttcttgaaaaattcgccaattacggcttcaacaaa
tcgcatgcggcagcctatgccgtggtcagctaccagaccgcctggctgaaggccaatcac
ccggtcgagttcatggccgcggtgatgaactgcgatatccacctgaccgacaagctggcc
gtttacaagcgcgaggccgaccggatggggatcgagacggtgccgccttgcgtgaaccgc
tcggaggccctgttcagcgtcaaggacggcaagatcctctatgcgctcggcgcgctcaag
ggcgtgggcgtcgaggcgatgaacctgatcgtgcaggcgcgcgccgggcgtccctttgcc
gacatgcacgacttcgcccgccgcgtggacatgcgccgggtcggcaagcggccgctggag
atgctggcccgcgccggcgccttcgacgcgctggagccgaaccgggcgcgggtgctgaaa
tcgctggacgggctggtggcctggtccacggcggtgcaggaggcggcggcctccagccag
tcctcgctgttcggcgggggcgaggatctgccgccgccgcgtccggtcgccgcgcccgtc
tggatgccggccgagaagctggccgaggaacatgcggcggtcggcttctacctttcgggc
catccgctggacgactatcagccggcgctgcgccgcaagggggtgcagacgctcgccgag
gtgacgcaggcggcggccgacggggcgctggtggcgcagcttgccggcacggttgcgcat
cgccaggaaaagaaatctgcgcgcggcacccgctttgcctttgtcggcctgtccgatccg
accgggctttacgaggtcacggtgttctcggacacgctggacgcccatcgccagcatctg
gagccgggtgcgaacgtggtcttgcaggtgcaggtcgaaccttcgggcgatcaggtcaag
ctgctggcgcgctcggtcatgccgctggatcaggcggtggccgatgccggggcgaaccgc
ctggcggtcgagatcgccgggctggacgccgtgcccggcatcgccgaggcgctggcccgc
atccaggccgagctcaacgcccccgctcgcgcccgcggtcccatctcgctgcggctgaag
gacggcgccgatctggtcgatatcgagatcgccgaggacgcgcccctgaccacccccgcc
cgccaggcgctgcgcgtcgtcccgggggtgctggaggtggtcgaggagtag
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