KEGG   Paracoccus denitrificans: Pden_1921
Entry
Pden_1921         CDS       T00440                                 
Name
(GenBank) signal recognition particle-docking protein FtsY
  KO
K03110  fused signal recognition particle receptor
Organism
pde  Paracoccus denitrificans
Pathway
pde02024  Quorum sensing
pde03060  Protein export
pde03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pde00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Pden_1921
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Pden_1921
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Pden_1921
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pde02044]
    Pden_1921
Secretion system [BR:pde02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Pden_1921
SSDB
Motif
Pfam: SRP54 SRP54_N AAA_30 AAA_16 AAA_22 Zeta_toxin AAA_17 MeaB AAA_19 cobW PIF1 ABC_tran MobB CbiA nSTAND3 APS_kinase AAA_33 AAA ATP_bind_1 TrwB_AAD_bind Thymidylate_kin YqeC TPP_enzyme_M DO-GTPase2 T2SSE KTI12 AAA_31 NACHT AAA_24 SLFN-g3_helicase ResIII AAA_14 AAA_18 Viral_helicase1 AAA_7 AAA_23 AAA_29 NB-ARC ADK
Other DBs
NCBI-ProteinID: ABL70015
UniProt: A1B3C1
LinkDB
Position
1:1916810..1917850
AA seq 346 aa
MSFFSKLRDRLTRSSSKIGSGLEDIVSEAAADEKPASPAPAASQPATEPEARPGVLGRLL
GRAPAVAEPRRELDDAMLEELEEMLIQADMGVETALRVTANIAEGRMGRRVSATELKELL
ADEIARIMTPVAKPLPLYPKRPQVVLVVGVNGSGKTTTIGKLASQFKAAGKKVVIAAGDT
FRAAAVEQLQVWGQRAGVPVMTAPEGSDPASLAFDAMTKAEAEGADLLMIDTAGRLQNRQ
DLMEELAKIVRVIRKKDPSAPHNTLLVLDATTGQNALSQVEIFRKLADVSGLVMTKLDGT
ARGGVLVALADRFGLPIHAIGVGEQIDDLDAFDARDFARALVGLGD
NT seq 1041 nt   +upstreamnt  +downstreamnt
atgtcgtttttctcgaagctgcgcgaccggctgacgcgatcctcgtccaagataggctcg
gggctggaggatatcgtctcggaagccgcagccgatgaaaagccggcctcgcccgccccc
gccgcatcgcaacccgcaaccgagccggaagcacgccccggcgtcctgggccggcttctg
ggccgcgccccggctgtcgccgaaccgcggcgcgaacttgacgatgcgatgctggaagag
cttgaggagatgctgatccaggccgacatgggcgtcgagaccgcattgcgcgtcaccgcc
aatatcgccgagggccgcatgggccgccgcgtctcggccaccgagctgaaagagctgctg
gccgatgagatcgcccgcatcatgacgccggtggcgaaacccctgccgctttatcccaag
cggccgcaagtggtgctggtggtgggggtgaacggttcgggcaagaccacgaccatcggc
aagcttgccagccagttcaaggcggccggcaagaaggtggtgatcgccgccggcgacacc
ttccgcgccgcagccgtcgagcaattgcaggtctggggccagcgcgccggggtgccggtg
atgaccgcacccgagggcagcgaccccgccagccttgccttcgacgccatgaccaaggcc
gaggccgagggtgccgacctgttgatgatcgacaccgccggccggttgcagaaccgccag
gacctgatggaagaactggccaagatcgtccgcgtcatccgcaagaaggacccctcggcc
ccgcacaacaccctgctggtgctggacgccaccaccggccagaacgcgctgagccaggtc
gagatcttccggaagctcgccgatgtctcgggtcttgtcatgaccaagctggacgggacg
gcgcgcggcggggtgctggtggcgctggccgaccgcttcggcctgccgatccatgccatc
ggggtgggcgagcagatcgacgatctcgacgccttcgacgcccgcgatttcgcccgtgcg
ctggtcggtctcggggactga

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