Paracoccus denitrificans: Pden_2010
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Entry
Pden_2010 CDS
T00440
Name
(GenBank) SSU ribosomal protein S12P methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pde
Paracoccus denitrificans
Brite
KEGG Orthology (KO) [BR:
pde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pde03009
]
Pden_2010
Enzymes [BR:
pde01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Pden_2010
Ribosome biogenesis [BR:
pde03009
]
Prokaryotic type
ribosomal protein modification factors
Pden_2010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
ABL70102
UniProt:
A1B3K8
LinkDB
All DBs
Position
1:complement(2017786..2019177)
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AA seq
463 aa
AA seq
DB search
MPAMSQNPPLLRPDLAPAPIFDTSRREGQPTIGMVSLGCPKALVDSERILTRLRAEGYAI
SPDYKGAGAVIVNTCGFLDSAKAESLQAIGEALAENGKVIVTGCLGAEPEYITGAHPSVL
AVTGPQQYEQVLDAVHHAVPPSPDPFVDLLPASGVKLTPRHYSYLKISEGCNHACKFCII
PDMRGKLVSRPAHAVIREAEKLVEAGVRELLVISQDTSAYGLDRKFATERGHRAHITDLA
RDLGQLGAWVRLHYVYPYPHVRDLIPLMAAHGESGGLVLPYLDIPFQHAHPDVLKRMARP
AAAARTLDEIAAWRAVCPDITLRSTFIVGYPGETEAEFQTLLDWLDEAQLDRVGCFQYEN
VKGARANDLPDHVPDDVKQDRWDRFMQKAQAISEAKLAAKVGHRIEVIVDAVDGDGATCR
TKADAPEIDGNLFIDEGFEDLAPGDIVSVTVDEAGEYDLWGRL
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgccggccatgagccagaacccgcccctgttgcgccccgatctagcccccgcgcccatc
ttcgacaccagccggagagagggccagcccaccatcggcatggtcagccttggctgtccc
aaggcgctggtggacagcgagcgcatcctgacgcgcctgcgggccgagggctatgccatc
agccccgactacaagggcgccggcgcggtgatcgtgaacacctgcggtttcctggacagc
gccaaggcggaatcgctgcaagccatcggcgaggcgctggcggaaaacggcaaggtgatc
gtgaccggctgcctgggcgccgagccggaatacatcaccggcgcgcatccgtcggtgctg
gccgtgacgggaccacagcaatacgaacaggtgctggatgcggtgcaccacgcggtgccg
cccagtcccgatcctttcgtggacctgctgccggcctcgggcgtcaagctgacgccgcgc
cattacagctatctgaagatttccgagggctgcaaccacgcctgcaagttctgcatcatc
ccggacatgcgcgggaagctggtcagccgtcccgcccatgcggtgatccgcgaggccgag
aagctggtcgaagccggggtgcgcgaattgctggtgatctcgcaggatacctcggcctac
gggctcgaccgcaagttcgcgaccgagcgcgggcaccgggcgcatatcaccgacctggcg
cgcgacctcgggcagcttggtgcctgggtgcggctgcattacgtctatccctacccgcat
gtgcgcgacctgatcccgctgatggccgcccatggggaatcgggggggctggtgctgccc
tatctggacatccccttccagcacgcccacccggacgtgctgaagcggatggcccgcccc
gccgcggcggcgaggacgctggacgagatcgccgcatggcgcgcggtctgtcccgacatc
acgctgcgctcgaccttcatcgtcggctatccgggcgagaccgaggccgagttccagacc
ctgctggactggctggacgaggcgcagttggatcgcgtcggctgcttccaatacgaaaac
gtcaagggcgcgcgggcgaacgacctgccggatcacgttcccgacgatgtgaagcaggat
cgctgggatcggttcatgcaaaaggcgcaggcgatctccgaggcgaagctggcggccaag
gtcggccaccgcatcgaggtgatcgtggatgccgtggatggtgacggcgccacctgccgc
accaaggcggatgcgcccgagatcgacggcaacctgttcatcgacgagggattcgaggat
ctggccccgggcgatatcgtcagcgtcaccgtggacgaggcgggcgaatacgatctttgg
ggccggctatag
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