Paracoccus denitrificans: Pden_2801
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Entry
Pden_2801 CDS
T00440
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pde
Paracoccus denitrificans
Brite
KEGG Orthology (KO) [BR:
pde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pde03016
]
Pden_2801
Enzymes [BR:
pde01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Pden_2801
Transfer RNA biogenesis [BR:
pde03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Pden_2801
Prokaryotic type
Pden_2801
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ABL70885
UniProt:
A1B5U1
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All DBs
Position
1:2822391..2823287
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AA seq
298 aa
AA seq
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MARKKGREIHGWLIVDKPAGIGSTDVVGKVRWALDAKKAGHAGTLDPDATGVLAVALGEA
TKTVPILTDALKAYDFTVSWGAETSTDDASGGVVKTSDARPDEAAIRAALPEFTGEIMQV
PPAVSAVRVDGARAYDLAREGEVVELAARPLWVESLELLGAARDSAELRMVCGKGGYVRS
IARDLGRKLGCLGHVAQLRRIWSGPFEAGDGFAFDRIDRANQAEIEAALLPLQAALADLP
EMQATEIGATRILNGNPGQVLGHAEFGEEVWVSRNGRALCIGRYMGGEVQPSRVFNLG
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgaaaaaagggacgcgagatccacggttggctgatcgtggacaagccggccggt
atcggctcgaccgacgtggtcggcaaggtccgctgggcactggacgcgaagaaggccggg
catgccgggacgctggacccggatgcgaccggcgtgctggccgtggcgctgggagaggcg
accaagaccgtgccgatcctgaccgacgcgctgaaagcctatgacttcacggtaagctgg
ggcgccgagacctcgaccgacgatgcctcgggcggggtggtgaaaaccagcgacgcgcgc
ccggacgaggcggcgatccgcgccgccctgccggaattcaccggcgagatcatgcaggtt
ccccccgccgtctcggccgtgcgcgtcgatggcgcgcgggcctatgacctcgcgcgagag
ggcgaggtggtcgagcttgccgcccgtccgctttgggtggaatcgctggagctgctgggc
gcggcccgcgacagcgccgagctgcgcatggtctgcggcaagggcggctatgtgcgcagc
attgcccgcgaccttggccgcaagctgggctgccttggccatgtcgcgcaactgcgccgc
atctggtcggggcccttcgaggccggggacggctttgccttcgaccgcatcgaccgtgcc
aaccaggccgagatcgaggcggcgctgctgcccctgcaagccgcgctggccgacctgccc
gagatgcaggcgaccgagatcggcgccacccgcatcctgaacggcaatcccggccaggtg
ctgggccatgccgaattcggcgaggaagtctgggtcagccgcaacggccgcgcactgtgc
atcggtcgctacatgggcggcgaggtgcagccctcgcgcgtgttcaacctgggctag
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