Paracoccus denitrificans: Pden_2856
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Entry
Pden_2856 CDS
T00440
Name
(GenBank) formate dehydrogenase alpha subunit
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
pde
Paracoccus denitrificans
Pathway
pde00630
Glyoxylate and dicarboxylate metabolism
pde00680
Methane metabolism
pde01100
Metabolic pathways
pde01120
Microbial metabolism in diverse environments
pde01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
pde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Pden_2856
09102 Energy metabolism
00680 Methane metabolism
Pden_2856
Enzymes [BR:
pde01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
Pden_2856
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
NADH-G_4Fe-4S_3
Fer4_7
Fer4
Fer4_21
Fer4_9
Fer4_8
Fer4_6
Fer4_10
Fer4_2
Fer4_18
Motif
Other DBs
NCBI-ProteinID:
ABL70940
UniProt:
A1B5Z6
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All DBs
Position
2:complement(22318..25197)
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AA seq
959 aa
AA seq
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MKDFIIPDRDMGTPAVKSDVTVNLLVDGIPVSVPAGTSVMRAAAVAGISVPKLCATDHVS
AFGSCRLCVVQIDGMRGLPASCTTPVAEGMVVHTQTDEVAQVRKGVMELYISDHPLDCLT
CAANGDCELQDMAGAVGLREVRYEPGKNHFARRDAEGPNPEYRPKDQSNPYFTFDPAKCI
VCSRCVRACEEVQGTFALTIEGRGFDSRVSAGLASDDFLSSDCVSCGACVQVCPTATLIE
NSVIQIGTPEHIVKTTCAYCGVGCSFDAHMRGEEVVRMVPSKDGKANHGHSCVKGRFAWG
YATHRERQTQPMVRERITDPWRVVSWDEALDFAATRLRQAQADFGRDSIGVITSSRCTNE
ETYLVQKLARAVFHNNNTDTCARVCHSPTGYGLKTTFGTSAGTHDFDSVDDTDLALVIGA
NPTDGHPVFASRLRKRLREGAGLIVLDPREIDLLKSPHMGEGLHLPLRPGTNVAMLTAMA
QVIVAEKLYDEAFIRERCDWDEFLAYAEFLMDPRHAPEEVEKLARVPAELIRKAARAYAA
APRASIYYGLGVTEHSQGSTTVMAIANLAMMTGNIGRPGTGVNPLRGQNNVQGSCDMGSF
PHEYPGYRHVSDPETRAIYERIWGVELSPEPGLRIPNMFDEALAGRFRGLYCQGEDIVQS
DPDTRHVTSALSAMDIVIVQDLFLNETANYAHVFLPGSSFLEKNGTFTNAERRINMVRRA
MTPKNGYEDWEVTQLLANRMGAAWTYVHPREIMAEIALTTPSFSGVSYDLLEREGSVQWP
CNDKAPLGTPLMHIDGFVRGRGKFVHTEYVATEERTGARFPLLLTTGRILSQYNVGAQTR
RTENVVWHPEDILEIHPSDAENRGVREGDWVRLASRSGDTTLRAHITERVAPGVVYTTFH
HPTTQANVVTTDNSDWATNCPEFKVTAVQVSPSNGPSDWQEEYRHHSDLARRILPTAAE
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatttcatcattcccgaccgcgacatgggcaccccggcggtcaagtccgacgtc
accgtgaacctgctggtggacgggattccggtctcggtccctgcaggcaccagcgtcatg
cgcgccgccgccgtggccgggatctcggtgcccaagctctgcgccaccgaccatgtcagc
gccttcggctcctgccggctttgcgtggtgcagatcgacggcatgcggggcctgccggca
tcctgcacgacgccggtggccgagggcatggtggtccacacccagaccgacgaggtcgcc
caggtccgcaagggggtgatggagctttacatctcggatcacccgctggattgcctgacc
tgcgccgccaacggcgattgcgaattgcaggacatggccggcgccgtcgggctgcgcgag
gtgcgctatgagccgggcaagaaccatttcgcccgccgcgacgccgaggggccgaacccg
gaataccggcccaaggaccagtcgaacccctatttcaccttcgatccggcgaaatgcatc
gtctgctcgcgctgcgtgcgggcctgcgaggaggtgcagggcacctttgcgctgaccatc
gaggggcggggcttcgacagccgcgtctcggccgggctggcgtcggacgatttcctgtcg
tcggattgcgtcagctgcggtgcctgcgtgcaggtctgtccgaccgccacgctgatcgag
aacagtgtgatccagatcggcacacccgagcatatcgtcaagacgacctgcgcctattgc
ggcgtcggctgctccttcgatgcgcatatgcgcggcgaggaggtggtgcgcatggtgccc
agcaaggacggcaaggcgaaccacggccacagctgcgtcaagggccgcttcgcctggggc
tatgccacgcatcgcgagcggcagacccagccgatggtgcgcgagcggatcaccgatccc
tggcgcgtggtcagctgggacgaggcgctggatttcgctgccacccggctgcggcaggcg
caggcggatttcgggcgcgattccatcggcgtcataacctcgtcgcgctgcaccaacgag
gaaacctatctggtgcagaagctcgcccgcgcggtctttcacaacaacaacaccgacacc
tgcgcccgggtctgccattcgcccaccggctacgggctcaagaccaccttcggcacctcg
gccggcacgcatgacttcgattcggtcgatgataccgacctggcgctggtcatcggcgcc
aacccgaccgacggccacccggtctttgcctcgcgcctgcgcaagcggctgcgcgagggt
gccgggctgatcgttctcgacccgcgcgagatcgacctgctcaagtccccgcatatgggc
gaagggctgcacctgcccctgcgtcccggcaccaacgtcgccatgctgacggccatggcg
caggtgatcgtggccgagaagctctatgacgaggccttcatccgcgagcgctgcgactgg
gacgagttcctggcctatgccgagttcctgatggaccctcgccatgcgcccgaggaggtc
gagaaactggcccgcgtaccggccgagctgatccgcaaggccgcccgcgcctatgcggcc
gcgccgcgtgccagcatctattacgggctgggcgtgaccgagcattcgcagggctcgacc
acggtgatggcgatcgccaacctggcgatgatgaccggcaatatcggcaggcccggcacc
ggcgtgaacccgctgcgcggccagaacaacgtgcagggctcctgcgacatgggcagcttc
ccgcatgaatatccgggctatcgccatgtctcggaccccgagacgcgcgcgatctacgaa
cggatctggggcgtcgagctgtcgcccgagccgggcctgcgcatccccaacatgttcgac
gaggcgctggccggacgcttccgtgggctttactgccagggcgaggacatcgtgcaatcc
gaccccgacacgcggcatgtgacctcggcgctgtcggcgatggacatcgtcatcgtgcag
gacctgttcctgaacgagaccgcgaactatgcgcatgtcttcctgccgggatcgagtttc
ctggaaaagaacggcaccttcaccaatgccgagcggcgcatcaacatggtccgccgcgcc
atgacgcccaagaacggctacgaggactgggaagtcacgcagttgctggcgaaccgcatg
ggggccgcctggacctatgtccacccgcgcgagatcatggccgagatcgcgctgaccacg
cccagtttctcgggcgtcagctacgatcttctggagcgcgagggctcggtgcagtggccc
tgcaacgacaaggcgccgctgggcacgccgctcatgcatatcgacggcttcgtgcgcggc
cggggcaagttcgtccataccgaatatgtcgcgaccgaggagcgcaccggggcacgcttc
ccgctgttgctgaccaccgggcggatcctgtcgcaatacaatgtcggcgcgcagacccgg
cggacggaaaacgtggtctggcaccccgaggacatcctggagatccacccctcggatgcc
gagaatcgcggcgtgcgcgagggcgactgggtgcggctggcctcgcgttcgggcgacact
acgctgagggcgcatatcaccgagcgggtggcgccgggcgtggtctataccaccttccat
cacccgacgactcaggccaatgtggtgacgacggacaattccgactgggccaccaactgc
cccgagttcaaggtgacggccgtgcaggtcagtccctcgaacggcccgtcggattggcaa
gaggagtatcgccatcattccgacctcgcccgccgcatcctgcccaccgctgccgagtga
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