Paracoccus denitrificans: Pden_3225
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Entry
Pden_3225 CDS
T00440
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
pde
Paracoccus denitrificans
Pathway
pde00071
Fatty acid degradation
pde00362
Benzoate degradation
pde00650
Butanoate metabolism
pde01100
Metabolic pathways
pde01120
Microbial metabolism in diverse environments
pde01200
Carbon metabolism
pde01212
Fatty acid metabolism
Module
pde_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
Pden_3225
09103 Lipid metabolism
00071 Fatty acid degradation
Pden_3225
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Pden_3225
Enzymes [BR:
pde01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Pden_3225
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
ECH_2
DAO
NAD_binding_2
NAD_Gly3P_dh_N
ApbA
UDPG_MGDP_dh_N
F420_oxidored
NAD_binding_8
Shikimate_DH
FAD_binding_3
Pyr_redox_2
TrkA_N
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
ABL71306
UniProt:
A1B712
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Position
2:complement(388262..390559)
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AA seq
765 aa
AA seq
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MITAIEKVAVLGAGVMGAGIAAHLANAGVRVVLLDVDKAAADAGIRRARDEGGFMDPAFA
ARIATGSTVRDLSLLADADWIVEALPERLALKQSLYRQLQGIRKPGSILSSNTSTIPLAA
LVGGMAGDFAADFLITHFFNPPRRMRLLELVAGPATRPEIVALITDFCDRRLGKDVVSCR
DTPGFIANRIGNYWMITAQNEAIRLGLDIEDADAIIGRPFGIPATGIFGLMDLVGIDLVP
TVIRSLQDALPPEDAINAYEAEPPIVGRLIAEGRTGRKAGAGYFRRSAGRVQEVMDLKTG
DYRAKRDGIPACVAETHGDPRKLMEHDSTGGEYALRVMQGTLAYAASLAPKIADGPDAVD
DAMRGGYGWSIGPFEMIDRLGPDWLAGVIAASGETLPPYLALAAERGGFHSIRDRIRTAL
LPDGGTAPRRRTEGALSLGELTQSGKPFADNGCAALWDIGEGVACLEIRTKMNTLSPPLL
EAIDKALDAVGQNFRALVIGSDAPRFSAGADLSALLRAVEAGGPDELLRTIHAGQRVFAA
IKRAPFPVVGAATGIALGGGCELLLHCDAIQAHADLQMGLVETKVGLVPGWGGCKELLLR
TTAAPSGGRGPAAIAASVFDVIANARVSSSAFDARKLGYLRPSDNITMNLDRLLADARQC
ALELADGYAAPQAETLALAGPSGLSGLEAQIDSGVLSGRMTAHDRQIGLALVGILTGGAL
ADPIRPLSEDELLALEAEAFIELFYTPQTRDRIDHMLATGKPLRN
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgataaccgccatcgaaaaggtagccgtacttggcgctggcgtcatgggcgcaggcatt
gccgcgcatctggcgaatgcgggtgtgcgggtcgttctgctggatgtcgacaaggcggca
gccgatgccggcatccggcgcgcgcgcgacgagggtggtttcatggacccggcattcgcg
gcccgcatcgcgacgggatcgaccgtcagggacctttcccttctcgcggacgcggattgg
atcgtcgaggccttgcccgagcggttggcgctgaagcaaagcctttaccggcagcttcaa
ggcatacgcaaacccggctcgatcttgtcatcgaacacctcgacgataccgcttgccgcg
ctggtcggcggcatggccggggacttcgcggccgatttcctgatcacccatttcttcaac
ccaccgcggcggatgcggctgctggaactggtcgcgggtccggccacccgccccgagatc
gtcgccctgatcacggacttctgcgaccgcaggctgggcaaggacgtggtgtcctgccgc
gacactccgggattcatcgccaaccggatcggcaattactggatgatcaccgcccagaac
gaagcgatccggctgggattggacatcgaggacgcggatgcgatcatcgggcgtccattc
ggcattccggcgacgggaatctttggcctgatggatctggtcggcatcgacctcgtccct
accgttattcgcagcttgcaagacgcactgccgcccgaagatgcgatcaacgcctatgag
gccgaaccaccaatcgtcggccggctgatcgccgaaggacgcacggggcgcaaggcgggc
gccggctatttccggcgttctgccgggcgggtgcaagaggtgatggatctgaagaccggc
gactaccgtgcgaagcgggacggcatcccggcatgcgttgcagaaacccacggcgatccg
cgaaagctgatggagcacgattctacgggtggcgaatatgccctgcgcgtgatgcagggt
acgcttgcctatgcggcgagccttgcgcccaagatcgccgacggccccgatgcggtcgat
gacgcgatgcgcggcggctatggctggagtatagggcccttcgaaatgatcgaccggctt
ggaccggattggctcgccggcgttattgcggcaagcggcgaaaccttgccgccctatctt
gccctagcggcggaacgcggcggcttccattcgatccgcgaccgcatcagaaccgcactt
ctgccggatggaggcacggcgccccgccgtcgcaccgaaggcgccctgagccttggcgaa
ctgacccagtcgggcaagccctttgcggataacggctgcgcggcgttgtgggatataggc
gaaggcgtcgcttgcctggaaatccgcaccaagatgaacaccctgtcgccgcctctgctg
gaggctatcgacaaggctcttgacgccgtgggccagaacttcagggccttggtcatcggc
agtgacgcgcctcggttcagcgccggggcagacctgtcggcgctgcttcgcgctgtcgag
gcgggcggaccggatgaacttctcaggaccatccacgcgggacaacgggtcttcgcggcc
atcaagcgggcgcccttccctgtcgtcggagcggccaccggcatcgcacttggcggcggg
tgcgagctgcttttgcactgcgacgcgatccaagcccatgcggaccttcagatgggcctt
gtcgagacgaaagtagggttggttccaggctggggaggatgcaaggagcttttgctgcgc
accaccgccgcaccttccggggggcgtggaccggcggcgattgcagccagcgtgtttgat
gtgatcgccaatgcacgcgtgtcatcaagcgcattcgacgcgcgcaagcttggatacctg
cgcccttcggacaacatcacgatgaacctcgaccggttgctggccgatgcacggcaatgc
gcgcttgaactggcagacggatacgccgcgccgcaagcggaaacgcttgccttggcaggc
ccttcgggtctgtccggtctcgaggcccagatcgacagcggggttctgagcggtcggatg
accgcccatgacaggcagatcggcctcgcactcgtaggtatcctgaccggcggtgccctc
gctgacccgatccgcccgctgtctgaggatgagctgctggcgctggaagccgaggcattc
atcgaactgttctacacaccgcaaacccgtgatcgcatcgaccatatgcttgcaaccgga
aaacctttgcggaactga
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