Paracoccus denitrificans: Pden_3649
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Entry
Pden_3649 CDS
T00440
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pde
Paracoccus denitrificans
Pathway
pde03030
DNA replication
pde03430
Mismatch repair
pde03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Pden_3649
03430 Mismatch repair
Pden_3649
03440 Homologous recombination
Pden_3649
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pde03032
]
Pden_3649
03400 DNA repair and recombination proteins [BR:
pde03400
]
Pden_3649
Enzymes [BR:
pde01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Pden_3649
DNA replication proteins [BR:
pde03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Pden_3649
DNA repair and recombination proteins [BR:
pde03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Pden_3649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_30
AAA_22
RuvB_N
AAA_5
AAA_14
AAA_16
AAA_19
PIF1
AAA_18
Rad17
AAA_24
Glyco_tranf_2_5
SLFN-g3_helicase
AAA_assoc_2
DUF6228
DUF815
DUF6894
TsaE
Motif
Other DBs
NCBI-ProteinID:
ABL71716
UniProt:
A1B872
LinkDB
All DBs
Position
2:complement(797816..799594)
Genome browser
AA seq
592 aa
AA seq
DB search
MSESERNYQVLARKYRPETFADLVGQDAMVRTLKNAFAADRIAQAFVMTGIRGTGKTTTA
RIIAKGLNCTGPDGQGGPTTEPCGVCEHCVAISEGRHVDVMEMDAASRTGVNDIREIIES
VHYRAASARYKIYIIDEVHMLSTSAFNALLKTLEEPPPHVKFIFATTEIRKVPVTVLSRC
QRFDLRRIEPEVMIALLRRIATTEGAQITDDALALITRAAEGSARDATSLLDQAISHGAG
ETTATQVRAMLGLADRGRVLDLFDMILRGAAAEALAELQAQYADGADPMAVLRDLAEITH
WVSIVKITPEALDDPTIGPDERARGQAIAEKVPMRALTRLWQMLLKALDEVGQAPNAMMA
AEMAIIRLTHVADLPDPETLIRKVQASAAAGEFSRNAAPSAARGEAPPRAAAPRTPVAVR
QDGSAAALAVSPDALAGFPDFESVIELIRRMRDMKLLLDVEDHLRLVRYSPGRIEFQPTD
KAPRDFAQRLAERLRGWTGGQRWAVTVTSEAGRPTISEQRAAREAEARARAMQNPTVQAI
FAAFPGAKITQIRPIPAPAAVEMPAGEDTSPHELTEGPVAEVEEWDPFEDED
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagagcgaacggaactatcaggtgctggcgcggaaataccgccccgagaccttc
gccgacctggtcggccaggacgcgatggtgcggacgctgaagaacgccttcgcggcagac
cggatcgcgcaggccttcgtgatgaccggcatccgcggcaccggcaagaccaccaccgcc
cgcatcatcgccaagggcctgaactgcaccggccccgacggccagggcggccccacgacc
gagccctgcggggtttgcgagcattgcgtcgcgatctccgagggccgccatgtcgacgtg
atggagatggacgcggcttctcgaaccggcgtcaacgacatccgcgaaatcattgaatcg
gttcactatcgcgcggcttcggcccgctacaagatctatatcatcgacgaagtccacatg
ctctcgaccagcgccttcaacgcgcttctgaagacgctggaggagccgccgccgcatgtg
aagttcatctttgccaccacggaaatccgcaaggtgccggtgacggttctgtcgcgctgc
cagcgcttcgacctgcgccgcatcgagcccgaggtgatgatcgcgctgctgcgccgcatc
gcgacgaccgaaggcgcccagatcaccgacgacgcgttggcgctgatcacgcgcgccgcc
gagggctcggcccgcgacgcgacctcgcttctggaccaggcgatcagccatggcgcgggc
gagacgacggcgacgcaggttcgcgccatgctggggctggcggatcgtggccgggtgctg
gacctcttcgacatgatcctgcgcggtgccgcggccgaggccctggccgaattgcaggcg
caatatgccgatggcgccgacccgatggcggtcttgcgcgacctggccgagatcacgcat
tgggtctcgatcgtgaagatcacccccgaggcgctggacgacccgaccatcggcccggat
gaacgcgcccgcgggcaggccattgccgaaaaggtgccgatgcgggcgctgacccggctg
tggcagatgctgctcaaggcgctggacgaggtgggccaggcccccaacgcgatgatggcg
gccgagatggcgatcatccgcctgacccatgtcgccgacctgcccgaccccgagacgctg
atccgcaaggtgcaggccagcgccgcggcgggcgaattcagccgcaacgccgccccctcc
gccgcgcgcggcgaagcgccgccccgggccgccgccccccgcacccccgtggcagtccgc
caggacggcagcgccgcggcgctcgcggtctcgcccgatgcgctggcggggtttcccgat
ttcgaatcggtgatcgaactgatccggcgcatgcgcgacatgaagctgctgctggatgtc
gaggatcacctgcgcctcgtgcgctattcgcccggccggatcgagttccagccgaccgac
aaggccccgcgcgacttcgcccagcggttggcggagcggctgcgcggctggacgggcggc
caacgctgggccgtgaccgtgacctcggaggccggccggcccacgatcagcgagcaacgc
gcggcgcgcgaggccgaggcccgcgcccgcgccatgcagaacccgaccgtgcaggcgatc
ttcgccgccttccccggcgcgaagatcacgcagatccggcccatcccggcgccggccgcg
gttgaaatgcccgcgggcgaggatacatccccgcatgagctgaccgaaggcccggtggcc
gaggtcgaggaatgggaccccttcgaggacgaggattag
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