Paracoccus denitrificans: Pden_3894
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Entry
Pden_3894 CDS
T00440
Name
(GenBank) acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
pde
Paracoccus denitrificans
Pathway
pde00300
Lysine biosynthesis
pde01100
Metabolic pathways
pde01120
Microbial metabolism in diverse environments
pde01230
Biosynthesis of amino acids
Module
pde_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pde00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Pden_3894
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pde01002
]
Pden_3894
Enzymes [BR:
pde01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
Pden_3894
Peptidases and inhibitors [BR:
pde01002
]
Metallo peptidases
Family M20
Pden_3894
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
DUF1319
Motif
Other DBs
NCBI-ProteinID:
ABL71960
UniProt:
A1B8W6
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All DBs
Position
2:complement(1028190..1029491)
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AA seq
433 aa
AA seq
DB search
MDALALEIENRRDDLIRLTQDLIRIPTLNPPGRNYREICEYLQARLAPRGWTCELIRAHG
APGDSEAFPRWNLVARHRGGPRGECVHFNSHHDVVEVGHGWSRDPFAAELDDGRIYGRGA
CDMKGGLAASIIAAEAFTALYPDHPGQIEISATADEESGGFGGVAYLAGQGAFAHVGHVI
IPEPLHKDRICLGHRGVWWAEIETHGRIAHGSMPFLGDSAIRHMGAVLEEMERTLFPLLM
TKRTQMPVIPEGARNSTLNINSIHGGEPDLGPDFTGLPAPCVADRCRIIIDRRFLIEEEL
SEVKREVAALLEKVKAQRPGFTYEIRDLFEVIPSMTDREAPVVRSTAAAIERVLGREAGY
VVSPGTYDQKHIDRIGKLKNCIAYGPGVLDLAHQPDEWVGVQDMQDSARVMALVLDDILH
GASGDSPGRPPVA
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgcttgccctcgaaatcgaaaaccgccgcgacgatctgatccgcctgacgcag
gatctgatccgcattccgacgctgaacccgccgggccgcaactatcgcgagatctgcgaa
tatcttcaggcacggctggcgccccggggctggacctgcgaactgatccgcgcccacggt
gccccgggcgacagcgaggcctttccgcgctggaacctggtcgcccgccatcggggcggc
ccgcgcggcgaatgcgtgcatttcaacagccatcacgacgtggtcgaggtcggccatggc
tggagccgcgatccctttgccgcggaactggacgacgggcggatctatggccgcggcgcc
tgcgacatgaagggcgggctggccgccagcatcatcgccgccgaagcctttaccgcgctt
taccccgaccatccgggccagatcgagatcagcgccacggcggacgaggaatcgggcggc
ttcggcggcgtggcctatctggcaggccagggcgcctttgcccatgtcggccatgtcatc
atccccgagcccctgcacaaggaccgcatctgcctgggccatcgcggtgtatggtgggcc
gagatcgagacgcacggccgcatcgcccatggctcgatgcccttcctgggcgacagcgcc
atccgccacatgggcgcggtgctggaagagatggagcgcacgctgttcccgctgctcatg
accaaacggacccagatgccggtgatccccgaaggcgcgcgcaattcgacgctgaacatc
aactcgatccatggcggcgagccggatctcggcccggatttcaccggcctgccagcgccc
tgcgtcgccgaccgctgccgcatcatcatcgaccgccgcttcctgatcgaagaggaactg
tcggaagtaaagcgcgaggtcgccgcgctcctggaaaaggtcaaggcgcaaaggcccggt
ttcacctatgaaatccgcgacctgttcgaggtgatccccagcatgaccgaccgcgaggcg
ccggtggtgcgctcgaccgccgccgccatcgagcgggtgctgggccgcgaggctggctat
gtggtcagccccggcacctatgaccagaagcatatcgaccgcatcggcaagctgaagaac
tgcatcgcctacgggccgggcgtgctggacctggcgcatcagcccgacgaatgggtcggc
gtgcaggatatgcaggattccgctcgtgtcatggccctggtgctcgacgacatcctgcac
ggcgcatcgggggattcccccggccggccgcctgtggcatga
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