Paracoccus denitrificans: Pden_3922
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Entry
Pden_3922 CDS
T00440
Name
(GenBank) transcriptional regulator, IclR family
KO
K13641
IclR family transcriptional regulator, acetate operon repressor
Organism
pde
Paracoccus denitrificans
Brite
KEGG Orthology (KO) [BR:
pde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pde03000
]
Pden_3922
Transcription factors [BR:
pde03000
]
Prokaryotic type
Helix-turn-helix
IclR family
Pden_3922
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Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
HTH_24
HTH_20
Dimerisation
HTH_23
MarR
HTH_38
HTH_Crp_2
HTH_11
HTH_DeoR
HTH_29
HTH_5
HTH_9
HTH_40
LexA_DNA_bind
HTH_31
HTH_Tnp_ISL3
HTH_Cmi2_C
HTH_PafC
GntR
TrmB
Fe_dep_repress
Rrf2
HTH_7
GerE
DUF7646
Motif
Other DBs
NCBI-ProteinID:
ABL71988
UniProt:
A1B8Z4
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Position
2:1057325..1058164
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AA seq
279 aa
AA seq
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MSVQIRKRGRPRGRAGGLGAEDSGGIRALDRALDILDLIAVSSGLTLTEIAQRLDMAPST
VHRVLVTLAARGVAESDSQTQAWHVGPTAFRHGSAFMRRSGLVERARPLLRRLMEVTGET
ANLGILNGDAVLFLSQAETHETIRAFFPPGTRSALHASGIGKALLAHARPLDLKRMLREM
RLERFTDMTLTDPAALVEDLVQIRARGYALDNEERTPGMRCIAAPIFDLAGEAAAGISVS
GPTLRMSDARLSAMSDAVIEAARELSFGMAPRKDAGERA
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttcaaatccgcaaaaggggccgtccgaggggacgtgccggcggccttggcgcc
gaggattcgggcggcatccgggcgctggaccgggcgctggacatccttgacctgatcgcg
gtctccagcgggttgaccctgaccgagatcgcgcagcggctggacatggcgccttcgacc
gtgcaccgggtgctggtgacgctggcggcgcgcggggtggcggaaagcgacagccagacg
caggcatggcatgtcgggccgacggcgttccggcacggctcggccttcatgcgccgctcg
ggcctggtcgagcgggcgcggccgcttctgcgccggctgatggaggtgacgggcgagacg
gcgaacctgggcatcctgaacggcgatgcggtcctgttcctaagccaggccgagacgcat
gagacgatccgcgccttctttccgcccggcacgcgctcggcgctgcatgcctcggggatc
ggcaaggcgttgctggcccatgcccggcccctggacctgaagcggatgctgcgcgagatg
cggctggagcggttcaccgacatgaccctgaccgatcccgcagcactggtcgaggatctc
gtgcagatccgcgcccgcggctatgcgctggacaacgaggagcgcacgcccggcatgcgc
tgcatcgccgcgccgatcttcgaccttgccggcgaggcggcggcggggatctcggtttcg
gggccgacattgcgcatgtcggatgcccggctttccgccatgtccgatgcggtgatcgag
gccgcgcgggagctgtccttcggcatggcgccgcgcaaggatgccggcgaaagagcctga
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