Paracoccus denitrificans: Pden_3945
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Entry
Pden_3945 CDS
T00440
Name
(GenBank) HhH-GPD family protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
pde
Paracoccus denitrificans
Pathway
pde03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Pden_3945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pde03400
]
Pden_3945
Enzymes [BR:
pde01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Pden_3945
DNA repair and recombination proteins [BR:
pde03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Pden_3945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
ABL72011
UniProt:
A1B917
LinkDB
All DBs
Position
2:1082244..1082867
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AA seq
207 aa
AA seq
DB search
MREIRAPADLEEGAAHLMRVCPVWARELPALMPLPLRRWPEGFPAIRDAVVSQQISTQAA
NAIAARMAAAGLADEAGIAAADDEALRAAGLSRPKIRYLRGIAGAGVDWAGLRDLPDEAV
IARLTALPGIGRWTADIYLKFALGRADAFAAGDLALAEAARLLHGLPERPRPAALTELAE
PWRPWRAVAARALWAYYRAAKGREGVR
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaaatccgcgccccggccgatctggaggagggcgcggcgcatctgatgcgggtc
tgtccggtctgggcgcgcgagttgccggcgctgatgccgctgccgctgcggcgctggccc
gaagggttcccggcaatccgcgatgcggtggtttcgcagcagatctcgacccaggctgcc
aatgccatcgccgcgcgcatggctgcggcggggctggccgatgaggcgggaatcgccgcc
gcggatgacgaggcgctgcgcgccgccggcctgtcgcggcccaagatccgctatctgcgc
ggcattgccggggcaggggtggactgggcgggcttgcgcgacctgcccgacgaggcggtg
atcgcccggctgaccgccttgccgggaatcgggcgctggaccgccgacatctatctgaaa
ttcgcgcttggccgggcggatgcctttgctgcgggtgatctggcgctggccgaggcggcc
cggctgctccatggcctgccggaacgcccccgtccggccgccctgaccgagctggccgag
ccgtggcggccctggcgggcggttgcggcccgggcgctctgggcctattaccgggccgca
aaagggcgcgagggcgtccgctga
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