Paracoccus denitrificans: Pden_4029
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Entry
Pden_4029 CDS
T00440
Name
(GenBank) phosphoribosylamine--glycine ligase
KO
K01945
phosphoribosylamine---glycine ligase [EC:
6.3.4.13
]
Organism
pde
Paracoccus denitrificans
Pathway
pde00230
Purine metabolism
pde01100
Metabolic pathways
pde01110
Biosynthesis of secondary metabolites
Module
pde_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
pde00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
Pden_4029
Enzymes [BR:
pde01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.13 phosphoribosylamine---glycine ligase
Pden_4029
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Gene cluster
GFIT
Motif
Pfam:
GARS_A
GARS_N
GARS_C
CPSase_L_D2
ATP-grasp
ATP-grasp_3
Dala_Dala_lig_C
CdiA_helical
DUF3197
Motif
Other DBs
NCBI-ProteinID:
ABL72095
UniProt:
A1B9A1
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All DBs
Position
2:1177155..1178417
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AA seq
420 aa
AA seq
DB search
MNILILGSGGREHALAWAIRQNPKCDRLFVAPGNAGMEPLARLADLDILSGPAVIGFCEE
NAIDLVVIGPEAPLAAGVADELRAAGILAFGPSRAAAMLEASKSFTKEVCDACGAPTAAW
ARFDAAEPARAYIRAQGAPIVVKADGLAAGKGVTVAMTEAEAIAAVDDAFGGAFGEAGAE
VVIEEFMAGEEASFFVLCDGKDCLPIGTAQDHKRAFDGDTGPNTGGMGAYSPAPVLTQAI
QDQVMEQIVRPTVAEMARRGTPFQGVLYAGLMIEHGRARLVEYNVRFGDPECQVLMMRLG
AQALDLILACAEGRLGDMAVSWAQDHALTVVLAAKGYPGAYEKGSAIRGLDALPEDSFRM
VFHAGTARRDGQIVATGGRVLAATGRGATLAEAHARAYALVDAIDWPEGFCRRDIGWRAL
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcctgatcctcggcagcggcgggcgcgaacatgcgctggcctgggcgatccgg
cagaacccgaaatgcgaccggctgttcgtcgcgcccggcaatgccgggatggaacccctg
gcgcgactggcggatctggacatcctgtccggccccgccgtgatcggcttttgcgaggag
aacgccatcgacctggtggtgatcggccccgaggcgccgctggccgccggcgtcgccgac
gaattgcgcgcagcgggcatcctggccttcgggccgtccagggcggcggcgatgctggag
gcatcgaaaagcttcaccaaggaggtctgcgacgcctgcggcgcccccaccgccgcctgg
gcgcgtttcgatgcggccgaaccggcgcgggcctatatccgcgcgcagggcgcacccatc
gtcgtcaaggccgacgggctggccgccggcaagggcgtgaccgtcgccatgaccgaggcc
gaggccatcgccgcagtggacgacgctttcggcggtgccttcggcgaggccggcgccgag
gtggtgatcgaggaattcatggccggcgaggaggcgagcttcttcgtcctttgcgacggc
aaggactgcctgcccatcggcacggcacaggaccacaagcgcgcctttgacggcgatacc
gggccgaataccggcggcatgggggcctattcccctgccccggtgctgacccaggcgatc
caggaccaggtgatggagcagatcgtgcgccccaccgtggccgagatggcgcggcgcggc
acgccgttccagggcgtgctctatgccgggctgatgatcgaacacggccgggcgcggctg
gtggaatacaacgtccgcttcggcgatccggaatgccaggtgctgatgatgcggctgggc
gcgcaggcgctggacctgatcctggcctgcgccgagggccggctgggcgacatggcggtc
agttgggcccaggaccatgccctgaccgtggtgctggccgcgaagggttatcccggcgcc
tatgagaagggcagcgcgatccgcgggctcgatgcgctgcccgaggacagcttccgcatg
gtcttccatgccgggacggcgcggcgggacgggcagatcgtcgccaccggcgggcgggtt
ctggcggcgaccgggcgcggcgcgacgctggccgaggcgcatgcgcgcgcctatgcgctg
gtggatgccatcgactggcccgagggattctgccgccgcgacatcggctggcgcgcgctt
tga
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