KEGG   Paracoccus denitrificans: Pden_4127
Entry
Pden_4127         CDS       T00440                                 
Name
(GenBank) two component, sigma54 specific, transcriptional regulator, Fis family
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
pde  Paracoccus denitrificans
Pathway
pde02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pde00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Pden_4127
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pde02022]
    Pden_4127
Two-component system [BR:pde02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   Pden_4127
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_lid_14 HTH_8 AAA_5 FleQ MCM cREC_REC VpsR AAA_16 HD-CE AAA_22 AAA_2 nSTAND3 OKR_DC_1_N
Other DBs
NCBI-ProteinID: ABL72191
UniProt: A1B9J7
LinkDB
Position
2:complement(1281036..1282424)
AA seq 462 aa
MSDILIVDDERDIRELISDILRDEGFSTRLAANSDQAVAELNAAEPALMILDIWLKDSKM
DGIDILKQVKRNNPDVPVVIISGHGNIEIAVAAIKQGAYDFIEKPFNIDQLLVVIRRAME
TARLRRENATLKRGEARAAEMLGNSAPFRRLREQLDKVAKSNGRVMLTGEPGAGKEIAAR
YVHAQSPRAREPFVTVPCATIEPEHMEEVLFGRETAERGIEPGLLEQAHGGVIYFDEVAD
MPLGTQPKILRVLTEQQFQRAGGTDKVRVDLRVISSTNRDLAAEIAAGRFRQELYDRLNV
VPVAVPSLAERRDDIPMLATHFIELFHASQGLPQRALPEETSAALQAMNWPGNIRQLRNV
IERVLILGDGTGPIQPSELESQNGSAGTSEALALGPQITSLALREARELFEREYLLAQIN
RFGGNISRTAQFVGMERSALHRKLKSLGVVGGMRVEEEMMGK
NT seq 1389 nt   +upstreamnt  +downstreamnt
atgagcgatattctgattgtcgatgacgagcgggacatccgcgaactgatttccgacatc
ctgcgcgacgagggcttctcgacccgcctcgccgccaattccgaccaggcggtggccgag
ctgaacgcggccgagccggcgctgatgatcctcgacatctggctcaaggatagcaagatg
gacgggatcgacattctcaagcaggtcaagcgcaacaacccggacgtgccggtggtcatc
atctcgggccacggcaatatcgagatcgcggtggcggcgatcaagcagggcgcctacgac
ttcatcgagaagcccttcaacatcgaccagttgctggtggtgatccgccgcgccatggag
acggcgcgcctgcgccgcgagaacgcgacgctgaagcgcggcgaggcacgggcggccgag
atgctgggcaattcggcgcccttccgcaggctgcgcgaacagctcgacaaggtggcgaaa
tcgaacggccgggtgatgctgaccggcgagccgggggcgggcaaggagatcgccgcgcgc
tatgtccacgcccagagcccgcgggcgcgcgagcccttcgtcaccgtgccctgcgccacc
atcgagcccgagcacatggaggaggtgctgttcggccgcgagaccgccgaacgcggcatc
gagccgggcctgctggagcaggcgcatggcggggtgatctatttcgacgaggtggcggac
atgccgctgggcacccagcccaagatcctgcgcgtgctgaccgagcagcagttccagcgc
gccggcggcactgacaaggtgcgggtggatctcagggtgatttcctcgaccaatcgcgac
cttgcggccgagatcgccgccggccgcttccggcaggaactctacgaccggctgaacgtg
gtgccggtggcggtgccctcgcttgcggagcgccgcgacgacatcccgatgctggccacg
catttcatcgaactgttccacgccagccagggcctaccgcagcgtgccctgcccgaggaa
accagtgccgcgctgcaggcgatgaactggccgggcaatatccgccagctgcgcaacgtg
atcgagcgcgtgctgatcctgggcgacgggaccgggccgatccagccctcggaactggaa
agccagaatggcagcgccggcaccagcgaggccttagcgctcggcccgcagatcaccagc
ctggcgctgcgcgaggcccgcgagcttttcgagcgcgaatacctgctggcgcagatcaac
cgcttcggcggcaatatcagccgcacggcgcaattcgtcggcatggagcgctcggcgctg
catcgcaagctcaagtcgctgggcgtcgtcgggggcatgcgcgtcgaggaggagatgatg
gggaaatga

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