Paracoccus denitrificans: Pden_4295
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Entry
Pden_4295 CDS
T00440
Name
(GenBank) ATP-dependent DNA helicase, Rep family
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pde
Paracoccus denitrificans
Pathway
pde03420
Nucleotide excision repair
pde03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Pden_4295
03430 Mismatch repair
Pden_4295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pde03400
]
Pden_4295
Enzymes [BR:
pde01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Pden_4295
DNA repair and recombination proteins [BR:
pde03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Pden_4295
MMR (mismatch excision repair)
Other MMR factors
Pden_4295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
DUF7742
CarD_TRCF_RID
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
ABL72359
UniProt:
A1BA15
LinkDB
All DBs
Position
2:complement(1472593..1474992)
Genome browser
AA seq
799 aa
AA seq
DB search
MSNFDDSDAFEAAAAPVPLSQRAMGARPTPYLDGLNPAQRAAVEALDGPVLLLAGAGTGK
TRALTTRIAHLLNLGLARPGQILAVTFTNKAAREMKDRIGRLLGEMVEGMPWLGTFHSIS
VKILRRHAELIGDGELHLKPSFTILDTDDQIRLLKQLIQAENIDEKRWPARQLAHLIDGW
KNRCLSPAKLPKGEERAFDGWGGRLYAAYQRRLLELNAVDFGDLLMHCVNLFQAHPDVLR
TWQDRFRYILVDEYQDTNVAQYMWLRLLAQAHRNICCVGDDDQSIYGWRGAEVGNILRFE
SDFPGAQVIRLEQNYRSTPHILAAASGLIAANKGRLGKTLWTEAEEGERVRLIGHWDSEA
EARWIGEEIEAFQGGHRHSIGRRSLNDIAILVRASHQMRAFEDRFMTIGLPYRVIGGPRF
YERQEIRDAMAYFRLAVSPTDDLAFERIVNVPKRGLGDKAVQKIQVEARERGLSLLEGAA
SAVASGALGGKGAGALRQFTEAMGRWHADALDSRMNHVELAERILDESGYTAMWQNDKSP
DAPGRLDNLKELIKALEEFENLQGFLEHVALVMDNDRGEQSEEVSIMTLHAAKGLEYPIV
FLPGWEDGLFPSQRSMDESGMKGLEEERRLAYVGITRGEELVTISFAGNRRMYGQWQSSL
PSRFIDELPEDHVEVLTPPGLYGGGYGAAVQPFAQSVMHERAARADVYNSPGWKRMQERS
AQRAQPVHRTPVVIDAEPAARFSVGDRVFHQKFGNGTVMGIAEDTLTVEFPTGFKTIKAG
YVQPASQAGGAGSLDDVPF
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatttcgacgactcggacgccttcgaggccgcagccgccccggttccgctttcc
cagcgtgccatgggcgcacggccgacgccctatctggatgggttgaacccggcgcaacgc
gcggccgtcgaggcgctggacgggccggtcctgctgcttgcgggtgccggcaccggcaag
acccgcgccctgaccacgcgcatcgcgcacctgctgaacctgggcctcgcccggcccggg
cagatcctggccgtgacctttaccaacaaggccgcgcgcgagatgaaggaccgcatcggc
cggctcttgggcgagatggtcgagggcatgccctggcttggcaccttccactcgatcagc
gtcaagatcctgcgccgccatgccgaactcatcggcgatggcgagctgcacctgaagccc
agcttcaccatcctggacaccgacgaccagatccggctgctcaagcagctgatccaggcc
gagaatatcgacgagaagcgctggccggcgcggcaactcgcgcatctgatcgacggctgg
aagaaccgctgcttgtccccggccaagctgcccaagggcgaggaacgcgctttcgacggt
tggggcgggcggctttacgccgcctatcagcgccggctgctggaactgaacgcggtcgat
ttcggcgacctgctgatgcattgcgtcaacctgttccaggcgcatcccgacgtgctgcgg
acttggcaggaccgtttccgctatatcctggtggacgagtatcaggacaccaacgtcgcg
caatacatgtggctgcggctgttggcgcaggcgcatcgcaacatctgctgcgtgggcgac
gacgaccagtcgatctatggctggcgcggcgccgaggtcggcaacatcctgcggtttgaa
agcgatttccccggcgcgcaggtgatccggttggagcagaactatcgctcgaccccgcat
atccttgccgccgcctcggggctgatcgcggcgaacaaggggcggctgggcaagacgctg
tggaccgaggccgaagaaggggagcgcgtgcgcctgatcggccattgggacagcgaggcc
gaggcgcgctggatcggcgaggagatcgaggcgttccaaggcggtcatcgccactccatc
ggccggcgcagcctgaacgacattgccatcctcgtgcgcgccagccaccagatgcgggcc
ttcgaggaccgcttcatgaccatcggcctgccttaccgggtgatcggcggcccgcgcttc
tacgagcggcaggaaatccgcgacgccatggcctatttccggctggcggtcagccccacc
gacgacctggccttcgagcgtatcgtgaacgtgcccaagcgcggcctgggcgacaaggcg
gtgcagaagatccaggtcgaggcgcgggaacgcgggctgtcgcttctggagggcgcggcc
tcggccgtggccagcggcgcgcttggcggcaagggggcgggggcgctgcggcagttcacc
gaggccatgggccgctggcatgccgatgcgctggacagtcgcatgaaccatgtcgagctg
gccgagcggatcctggacgaatccggctataccgccatgtggcagaacgacaagtcgccc
gacgcgccggggcggctcgacaacttgaaagaattgataaaggcgctggaagaatttgaa
aaccttcaaggtttcctcgagcatgtcgcgctggtcatggacaatgacaggggcgagcag
tccgaggaggtctcgatcatgacgctgcatgccgccaaggggctggaatatcccatcgtc
ttcctgccgggctgggaggatgggctgttccccagccagcgcagcatggacgaaagcggc
atgaaagggttggaagaagagcggcgcctggcctatgtcggcatcacgcgcggcgaggaa
ctggtgacgatcagctttgccggcaaccgccgcatgtatgggcaatggcaatcgtcgctg
ccttcgcgcttcatcgacgaactgcccgaggatcatgtcgaggtgttgaccccgccgggc
ctttacggcggcggctatggcgcggcggtccagccctttgcgcaatcggtcatgcatgaa
cgcgcggcgcgggcggatgtctataactcgccgggctggaagcggatgcaggaacggtcc
gcccagcgtgcgcagcccgtccaccgcacgccggtcgtcatcgatgccgagccggcggcg
cgattttcggtcggcgaccgggtgttccaccagaaattcggcaacggcaccgtcatgggc
atcgccgaggatacgctgaccgtcgaattcccgaccggcttcaagaccatcaaggcgggc
tatgtgcagcccgcctcgcaggccggtggggccggctcgctggacgacgtgccgttctag
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