KEGG   Paracoccus denitrificans: Pden_4346
Entry
Pden_4346         CDS       T00440                                 
Name
(GenBank) colicin V processing peptidase, Cysteine peptidase, MEROPS family C39
  KO
K13409  ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
Organism
pde  Paracoccus denitrificans
Pathway
pde02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:pde00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    Pden_4346
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:pde01002]
    Pden_4346
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:pde02000]
    Pden_4346
   02044 Secretion system [BR:pde02044]
    Pden_4346
Peptidases and inhibitors [BR:pde01002]
 Cysteine peptidases
  Family C39
   Pden_4346
Transporters [BR:pde02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB-BAC subgroup
    Pden_4346
Secretion system [BR:pde02044]
 Type I secretion system
  RaxAB-RaxC type I secretion system protein
   Pden_4346
SSDB
Motif
Pfam: ABC_membrane Peptidase_C39 ABC_tran SMC_N AAA_16 AAA_21 RsgA_GTPase AAA_18 AAA_22 Rad17 Mg_chelatase
Other DBs
NCBI-ProteinID: ABL72410
UniProt: A1BA66
LinkDB
Position
2:1529573..1531753
AA seq 726 aa
MNHELLSRLSSRITSRTPVILQGEAAECGLACMAMIAGHHGHRLDLPAIRRRIALAMCGA
TLKDLVQLGGRLGLATRALRLGMDDLRRLRLPCILHWNHRHFVVLTRVTGRHAHIHDPAI
GQRRLPLDEVSAAFTGIALEAWPTGEFRRCDERARIRLTDLVLRTAGIGRAAVRVLAISA
LIEMVTIALPIGFQLVLDEVIVAADRDLLTLIAIALAMLLALQVGANLARTWIAMLVGSS
LILQWRVALFDRLMRLPLGFFEKRHVGDIVSRFSSVDSVQQVLTTNAIQSLLDGVMSVLL
VAMMWLYGGWLAAVALAGTLAYALFRLASYRAFRRMCEEGIIHAAQESTHFMESVRGIAS
VKVLGLEPRRRGTWINHLVERINAELRVQRLETWYQATGGLLFGLDRVLIIWLGVRAVIE
GGLSVGMFVAFLAYKDQFATRIVALIDTGLQFRMLSLHGERISDIALTEPEEPDEKHALP
TPPIAGGGAAALEVRGLGYRYAETEPMLLRELNLTVAPGECLGIAGPSGVGKTTLLKLLS
GLAAPLQGQILIDGVPVGSMGLAAYRARIGCVLQDDRLFAGSIRDNIAAFDSAVPQDWLH
ECARMAAIHDDIMALPMGYETLVGDMGSTLSGGQKQRVVLARALCRRPAVLFLDEATSHL
DSANEQAINAAVRRLPMTRIIVAHRDTTLATADRVLRLDGSGGLVAVPHGPRLPLRSADA
PVSAEG
NT seq 2181 nt   +upstreamnt  +downstreamnt
atgaaccatgagctgctgtcccgcctgtcgtcgcgcatcaccagccgcaccccggtgatc
ctgcagggcgaggcggcggaatgcggccttgcctgcatggcgatgatcgccggccatcac
ggccaccggctggacctgccggcgatccgccgccgcatcgcgctggcgatgtgcggcgcg
acgctgaaggacctggtgcagctgggcggccggctggggctggcgacgcgggcgctgcgg
ctgggcatggacgacctgcgccggctgcgcctgccctgcatcctgcattggaaccaccgg
catttcgtggtgctgacccgggtgacggggcgccacgcccatatccacgaccccgccatc
ggccagcgccggctgccgctggacgaggtctcggccgccttcaccggcatcgcactggag
gcctggccgacgggcgagttccggcgctgcgacgaacgcgcccgcatccgcctgaccgac
ctggtgctgcgcaccgccggcatcggccgggcggcggtgcgggtgctggcgatctcggcg
ctgatcgaaatggtgaccatcgcgctgcccatcggcttccagctggtgctggacgaggtg
atcgtggcggccgaccgcgacctcttgacgctgatcgccatcgcgcttgccatgctgctg
gccttgcaggtcggcgccaacctggcgcggacatggatcgccatgctggtcggctccagc
ctgatcctgcaatggcgggtggcgctgttcgaccggctgatgcgcctgccgctgggcttt
ttcgagaagcgccatgtcggcgacatcgtctcgcggttctcctcggtggacagcgtgcag
caggtgctgaccaccaacgccatccagtcgctgctggacggggtcatgtcggtgctgctg
gtggcgatgatgtggctttacggcggctggctggccgccgtcgcgctggccggcacgctg
gcctatgcgctgttccggctggcctcgtatcgcgccttccgccgcatgtgcgaggagggg
atcatccacgcggcccaggaaagcacgcatttcatggaatccgtgcgcggcatcgccagc
gtcaaggtgctgggcctggaaccgcgccgccgcggcacctggatcaatcatctggtcgag
cgcatcaacgccgaattgcgcgtgcagcggctggagacctggtatcaggccaccgggggg
ttgctgttcgggctggaccgggtgctgatcatctggctgggtgtgcgggcggtgatcgag
ggcgggctgtcggtcggcatgttcgtggccttcctggcctacaaggaccagttcgccacc
cgcatcgtcgcgctgatcgacaccgggctgcaattccgcatgctgtcgctgcatggcgag
cggatctcggacatcgcgctgaccgagccggaagagccggacgaaaagcacgccctgccc
acgccccccatcgcaggtggcggcgcggcggcgctggaggtgcgcggcctcggctatcgc
tatgccgagaccgagccgatgctgctgcgcgagctgaacctgacggtggcgccgggggaa
tgcctgggcatcgccggaccctcgggcgtgggcaagacgacgctgctgaaactgctctcg
gggctggccgcgcccttgcaggggcagatcctgatcgacggcgtgccggtgggcagcatg
gggctggcagcctatcgcgcccgcatcggctgcgtgctgcaggacgaccggctgttcgcc
ggctcgatccgcgacaacatcgccgccttcgacagcgccgtgccgcaggactggctgcac
gaatgcgcccggatggcggcgatccacgacgacatcatggcgctgcccatgggctatgag
acgctggtcggggacatgggcagcacgctgtcgggcgggcagaagcagcgggtggtgctg
gcgcgcgcgctgtgccggcggccggcggtgctgttcctggacgaggcgaccagccatctc
gacagcgccaacgaacaggcgatcaatgccgcggtccggcgcctgccgatgacgcggatc
atcgtggcgcatcgcgacacgacgctggcgacggccgaccgggtgctgcggctggacggc
tcgggcgggctggtcgcggtgccgcacggcccgcgcctgccgctgcgcagcgccgatgcg
ccggtttcggccgaaggctga

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