KEGG   Paracoccus denitrificans: Pden_4377
Entry
Pden_4377         CDS       T00440                                 
Name
(GenBank) ribonucleoside-diphosphate reductase class Ib alpha subunit
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
pde  Paracoccus denitrificans
Pathway
pde00230  Purine metabolism
pde00240  Pyrimidine metabolism
pde01100  Metabolic pathways
pde01232  Nucleotide metabolism
Module
pde_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
pde_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:pde00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    Pden_4377
   00240 Pyrimidine metabolism
    Pden_4377
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pde03400]
    Pden_4377
Enzymes [BR:pde01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     Pden_4377
DNA repair and recombination proteins [BR:pde03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    Pden_4377
SSDB
Motif
Pfam: Ribonuc_red_lgC RNR_N Ribonuc_red_lgN TRIC
Other DBs
NCBI-ProteinID: ABL72441
UniProt: A1BA97
LinkDB
Position
2:1567308..1569434
AA seq 708 aa
MLDDGVKAELDYHALNAMLNLYDGEGRIRFDADRKAARQYFLQHVNQNTVFFHSLDEKLG
YLVDEGYYEAEVLDQYPRAFLHRIWDAAYARKFRFPTFLGAFKYYTSYTLKTRDGRRYLE
RYEDRVVMVALALARGDEDLAMRFMEEILSGRFQPATPTFLNAGKKSRGELISCFLLRLE
DNMESIGRGINSALQLSKRGGGVALMLTNLREAGAPIKGIENQSSGVIPVMKLLEDSFSY
ANQLGARQGAGAVYLNAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDVTFELAKRNE
DMYLFSPHDVEKVYGLPFSEISVTEKYAEMVDDKRIRKKKINARAFFQTLAEIQFESGYP
YIMFEDTVNRANPVAGRISMSNLCSEILQVNEASEFDEDLGYRHLGTDISCNLGSLNIAA
TMDGPDFGATVEAAIRALTAVSEMSAIEAVPSIRRGNDEAHAVGLGQMNLHGFLARERIH
YGSPEGVEFTSVYFAAVAYHAIRASNLLAQEKGRTFKDFDKSKYADGSFFDKYVAQDWLP
TLPDVARVFEGVSLPTREDWAALRESVMRHGLYNRNLQAVPPTGSISYINNSTSSIHPIV
AKIEIRKEGKIGRVYYPAAFMSNENLDYYRDAYEIGPEAIIDTYAAATEHVDQGLSLTLF
FPAEATTRDINRAQIYAWKKGIKTIYYIRLRQTALEGTEVQGCVSCTL
NT seq 2127 nt   +upstreamnt  +downstreamnt
atgcttgacgatggcgtaaaggccgagctggactatcacgcgctgaatgcgatgctgaac
ctttacgacggcgagggccgcatccgcttcgacgcggatcgcaaggccgcgcggcagtat
ttcctgcagcatgtcaaccagaacaccgtcttcttccactcgctggacgaaaagctgggc
tatctggtcgacgagggctattacgaggccgaggtgctggaccagtatccgcgcgccttc
ctgcaccggatctgggacgcggcctatgcgcggaaattccgctttccgacctttctcggc
gccttcaagtattacaccagctatacgctgaagacccgcgacgggcggcgctatctggaa
cgctacgaggaccgggtggtcatggtcgcgctggcgctcgcgcgcggcgacgaggatctg
gccatgcgcttcatggaggaaatcctgtcgggccggttccagcccgccacgccgaccttc
ctgaacgccggcaagaagtcgcggggcgagctgatctcgtgcttcctgctgcggctggaa
gacaacatggaatccatcggccgcggcatcaattcggcgctgcagctttccaagcgcggc
ggcggcgtcgccctgatgctgaccaacctgcgcgaggccggcgcgccgatcaaggggatc
gagaaccagtcctcgggcgtcatcccggtgatgaaactgctggaggacagcttttcctat
gccaaccagcttggcgcgcggcaaggcgcgggggcggtctatctgaacgcgcatcacccc
gacatcctgcgcttcctggacaccaagcgcgagaacgccgacgaaaagatccgcatcaag
acgctgtcgctgggcgtggtgatcccggacgtgaccttcgaactcgccaagcgcaacgag
gacatgtacctgttctcgccccatgacgtggaaaaggtctatggcctgcccttctcggaa
atctcggtcaccgagaaatatgccgagatggtggacgacaagcgcatccgcaagaaaaag
atcaacgcccgcgccttcttccagacgctggccgagatccagttcgaaagcggctatccc
tacatcatgttcgaggacacggtgaaccgcgccaacccggtcgccggccgcatcagcatg
tcgaacctgtgcagcgagatcctgcaggtgaacgaggccagtgagttcgacgaggatctg
ggctatcgccacctcggcacggatatttcctgcaacctcggctcgctcaacatcgccgcg
accatggacgggccggatttcggcgcgaccgtcgaggcggcgatccgggcgctgaccgcg
gtgtcggagatgtcggccatcgaggccgtgccctcgatccggcgcggcaatgacgaggcc
catgccgtggggctgggccagatgaacctgcacggattcctggcgcgcgagcgcatccat
tacggcagccccgagggcgtcgagttcacctcggtctatttcgccgccgtggcctatcac
gccatccgcgcctcgaacctgctggcgcaggaaaagggccggaccttcaaggatttcgac
aagtcgaaatatgccgacggctcgttcttcgacaaatacgtcgcgcaggactggctgccc
acgctgcccgatgtcgcgcgggtgttcgagggcgtcagcctgcccacccgcgaggattgg
gcggcactgcgggaatcggtgatgcggcacgggctttacaaccgcaacctgcaggcggtg
ccgcccaccggctcgatcagctatatcaacaactcgaccagctcgatccatccgatcgtg
gccaagatcgagatccgcaaggaaggcaagatcggccgggtctattaccccgccgccttc
atgtccaacgagaacctggactattaccgcgacgcatacgagatcggacccgaggcgatc
atcgacacctatgccgccgcgaccgagcatgtcgaccaggggttgtcgctgacgctgttc
ttcccggccgaggccacgacgcgcgacatcaaccgcgcccagatctacgcctggaagaag
ggcatcaagacgatctattacatccggctgcgccagaccgcgctggaaggcaccgaggtg
cagggctgcgtttcctgcacgctttga

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